Researcher Directory - Osaka University

Yamashita Eiki

山下　栄樹

Institute for Protein Research, Associate Professor

Education

1995/04 - 1997/03, Osaka University, Graduate School of Science
1994/04 - 1995/03, The University of Tokushima, Graduate School of Engineering
1992/04 - 1994/03, The University of Tokushima, Graduate School of Engineering
1988/04 - 1992/03, The University of Tokushima, Faculty of Engineering, Department of Biological Science and Technology

Research History

2017/01 - Present, Osaka University, Institute for Protein Research
2007/04 - 2017/12, Osaka University
1997/07 - 2007/03, Osaka University, Institute for Protein Research
1997/04 - 1997/06, Japan Society for the Promotion of Science

Research Areas

Life sciences, Structural biochemistry

Papers

Determination of the three-dimensional structure of bacteriophage Mu(-) tail fiber and its characterization., Yukina Mori,Eiki Yamashita,Atsushi Nakagawa,Tomoki Matsuzawa,Minoru Inagaki,Yoshifumi Aiba,Syu Tanaka,Syunya Hatori,Maeda Ayami,Shigeki Takeda, Virology, Vol. 593, p. 110017-110017, 2024/05
Structure-function relationship of KaiC around dawn, Yoshihiko Furuike,Eiki Yamashita,Shuji Akiyama, Biophysics and Physicobiology, Biophysical Society of Japan, Vol. 21, No. 1, p. n/a-n/a, 2024
Crystallographic cyanide-probing for cytochrome c oxidase reveals structural bases suggesting that a putative proton transfer H-pathway pumps protons., Atsuhiro Shimada,Jumpei Baba,Shuhei Nagao,Kyoko Shinzawa-Itoh,Eiki Yamashita,Kazumasa Muramoto,Tomitake Tsukihara,Shinya Yoshikawa, The Journal of biological chemistry, p. 105277-105277, 2023/09/22
Crystal Structure of the Multidrug effulx transporter BpeF from Burkholderia pseudomallei., T. Kato,L.-W. Hung,E. Yamashita,U. Okada,T.C. Terwilliger,S. Murakami, Worldwide Protein Data Bank, 2023/07/19
Crystal structures of multidrug efflux transporters from Burkholderia pseudomallei suggest details of transport mechanism, Takaaki Kato,Ui Okada,Li-Wei Hung,Eiki Yamashita,Heung-Bok Kim,Chang-Yub Kim,Thomas C. Terwilliger,Herbert P. Schweizer,Satoshi Murakami, Proceedings of the National Academy of Sciences, Vol. 120, No. 29, 2023/07/18
Multifunctional chemical inhibitors of the florigen activation complex discovered by structure-based high-throughput screening., Ken-Ichiro Taoka,Ikumi Kawahara,Shoko Shinya,Ken-Ichi Harada,Eiki Yamashita,Zenpei Shimatani,Kyoko Furuita,Tomoaki Muranaka,Tokitaka Oyama,Rie Terada,Atsushi Nakagawa,Toshimichi Fujiwara,Hiroyuki Tsuji,Chojiro Kojima, The Plant journal : for cell and molecular biology, Vol. 112, No. 6, p. 1337-1349, 2022/10/26
Highly sensitive tryptophan fluorescence probe for detecting rhythmic conformational changes of KaiC in the cyanobacterial circadian clock system., Atsushi Mukaiyama,Yoshihiko Furuike,Eiki Yamashita,Shuji Akiyama, The Biochemical journal, Vol. 479, No. 14, p. 1505-1515, 2022/07/29
Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition., Ken-Ichi Harada,Kyoko Furuita,Eiki Yamashita,Ken-Ichiro Taoka,Hiroyuki Tsuji,Toshimichi Fujiwara,Atsushi Nakagawa,Chojiro Kojima, Scientific reports, Vol. 12, No. 1, p. 11596-11596, 2022/07/08
Theoretical Model of the Far-Red-Light-Adapted Photosystem I Reaction Center of Cyanobacterium Acaryochloris marina Using Chlorophyll d and the Effect of Chlorophyll Exchange, Akihiro Kimura,Hirotaka Kitoh-Nishioka,Toshimichi Aota,Tasuku Hamaguchi,Koji Yonekura,Keisuke Kawakami,Kyoko Shinzawa-Itoh,Natsuko Inoue-Kashino,Kentaro Ifuku,Eiki Yamashita,Yasuhiro Kashino,Shigeru Itoh, The Journal of Physical Chemistry B, American Chemical Society (ACS), Vol. 126, No. 22, p. 4009-4021, 2022/05/26
Regulation Mechanisms of the Dual ATPase in KaiC, Yoshihiko Furuike,Atsushi Mukaiyama,Shin-ichi Koda,Damien Simon,Dongyan Ouyang,Kumiko Ito-Miwa,Shinji Saito,Eiki Yamashita,Taeko Nishiwaki-Ohkawa,Kazuki Terauchi,Takao Kondo,Shuji Akiyama, Proceedings of the National Academy of Sciences of the United States of America, Cold Spring Harbor Laboratory, Vol. 119, No. 19, 2021/10/28
Structure and function relationship of OqxB efflux pump from Klebsiella pneumoniae., Nagakumar Bharatham,Purnendu Bhowmik,Maho Aoki,Ui Okada,Sreevalli Sharma,Eiki Yamashita,Anirudh P Shanbhag,Sreenath Rajagopal,Teby Thomas,Maitrayee Sarma,Riya Narjari,Savitha Nagaraj,Vasanthi Ramachandran,Nainesh Katagihallimath,Santanu Datta,Satoshi Murakami, Nature communications, Vol. 12, No. 1, p. 5400-5400, 2021/09/13
Critical roles of the CuB site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates, Atsuhiro Shimada,Fumiyoshi Hara,Kyoko Shinzawa-Itoh,Nobuko Kanehisa,Eiki Yamashita,Kazumasa Muramoto,Tomitake Tsukihara,Shinya Yoshikawa, Journal of Biological Chemistry, Elsevier BV, Vol. 297, No. 3, p. 100967-100967, 2021/09
Elucidation of Master Allostery Essential for Circadian Clock Oscillation in Cyanobacteria, Y. Furuike,A. Mukaiyama,D. Ouyang,K. Ito-Miwa,D. Simon,E. Yamashita,T. Kondo,S. Akiyama, Science advances, Cold Spring Harbor Laboratory, Vol. 8, No. 15, 2021/08/31
The 1.3-Å resolution structure of bovine cytochrome c oxidase suggests a dimerization mechanism, Kyoko Shinzawa-Itoh,Miki Hatanaka,Kazuya Fujita,Naomine Yano,Yumi Ogasawara,Jun Iwata,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa,Kazumasa Muramoto, BBA Advances, Elsevier BV, Vol. 1, p. 100009-100009, 2021
Cooperative regulation of PBI1 and MAPKs precisely controls the master transcription factor WRKY45 in rice immunity, Kota Ichimaru,Kenichi Harada,Shusuke Shigeta,Koji Yamaguchi,Keita Shimada,Kazuya Ishikawa,Kento Inoue,Yusaku Nishio,Satomi Yoshimura,Haruhiko Inoue,Eiki Yamashita,Toshimichi Fujiwara,Atsushi Nakagawa,Chojiro Kojima,Tsutomu Kawasaki, Nature communications, Research Square, Vol. 13, No. 1, p. 2397-2397, 2020/09/09
Structure of the far-red light utilizing photosystem I of Acaryochloris, Tasuku Hamaguchi,Keisuke Kawakami,Kyoko Shinzawa-Itoh,Natsuko Inoue-Kashino,Shigeru Itoh,Kentaro Ifuku,Eiki Yamashita,Kou Maeda,Koji Yonekura,Yasuhiro Kashino, Nature communications, Research Square, Vol. 12, No. 1, p. 2333-2333, 2020/08/12
X-ray structures of catalytic intermediates of cytochrome c oxidase provide insights into its O2 activation and unidirectional proton-pump mechanisms., Atsuhiro Shimada,Yuki Etoh,Rika Kitoh-Fujisawa,Ai Sasaki,Kyoko Shinzawa-Itoh,Takeshi Hiromoto,Eiki Yamashita,Kazumasa Muramoto,Tomitake Tsukihara,Shinya Yoshikawa, The Journal of biological chemistry, Vol. 295, No. 17, p. 5818-5833, 2020/04/24
Author Correction: Conformational rearrangements of the C1 ring in KaiC measure the timing of assembly with KaiB., Atsushi Mukaiyama,Yoshihiko Furuike,Jun Abe,Shin-Ichi Koda,Eiki Yamashita,Takao Kondo,Shuji Akiyama, Scientific reports, Vol. 10, No. 1, p. 2702-2702, 2020/02/11
Muファージ・テールファイバーのシャペロンに対する予想外の分子結合活性の観察(Observation of unexpected molecular binding activity for Mu phage tail fibre chaperones), Sakai Kohei,Iwazaki Takuma,Yamashita Eiki,Nakagawa Atsushi,Sakuraba Fumiya,Enomoto Atsushi,Inagaki Minoru,Takeda Shigeki, The Journal of Biochemistry, (公社)日本生化学会, Vol. 166, No. 6, p. 529-535, 2019/12
Phage tail fibre assembly proteins employ a modular structure to drive the correct folding of diverse fibres, North Olesia I,Sakai Kouhei,Yamashita Eiki,Nakagawa Atsushi,Iwazaki Takuma,Buttner Carina R,Takeda Shigeki,Davidson Alan R, NATURE MICROBIOLOGY, Vol. 4, No. 10, p. 1645-1653, 2019/10
Monomeric structure of an active form of bovine cytochrome c oxidase, Kyoko Shinzawa-Itoh,Takashi Sugimura,Tomonori Misaki,Yoshiki Tadehara,Shogo Yamamoto,Makoto Hanada,Naomine Yano,Tetsuya Nakagawa,Shigefumi Uene,Takara Yamada,Hiroshi Aoyama,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa,Kazumasa Muramoto, Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol. 116, No. 40, p. 19945-19951, 2019/10/01
SPring-8 BL44XU, a synchrotron radiation beamline for biological macromolecular assemblies, operated by the Institute for Protein Research, Osaka University., Yamashita E,Nakagawa A, Biophysical reviews, Vol. 11, No. 4, p. 521-523, 2019/08
Low-dose X-ray structure analysis of cytochrome c oxidase utilizing high-energy X-rays, Ueno Go,Shimada Atsuhiro,Yamashita Eiki,Hasegawa Kazuya,Kumasaka Takashi,Shinzawa-Itoh Kyoko,Yoshikawa Shinya,Tsukihara Tomitake,Yamamoto Masaki, JOURNAL OF SYNCHROTRON RADIATION, Vol. 26, No. Pt 4, p. 912-921, 2019/07
Structures of the wild-type MexAB-OprM tripartite pump reveal its complex formation and drug efflux mechanism., Tsutsumi K,Yonehara R,Ishizaka-Ikeda E,Miyazaki N,Maeda S,Iwasaki K,Nakagawa A,Yamashita E, Nature communications, Vol. 10, No. 1, p. 1520-1520, 2019/04
Conformational rearrangements of the C1 ring in KaiC measure the timing of assembly with KaiB, Atsushi Mukaiyama,Yoshihiko Furuike,Jun Abe,Eiki Yamashita,Takao Kondo,Shuji Akiyama, Scientific Reports, Nature Publishing Group, Vol. 8, No. 1, 2018/12/01
BpeB, a major resistance-nodulation-cell division transporter from Burkholderia cenocepacia: Construct design, crystallization and preliminary structural analysis, Horikawa, T.,Hung, L.-W.,Kim, H.-B.,Shaya, D.,Kim, C.-Y.,Terwilliger, T.C.,Yamashita, E.,Aoki, M.,Okada, U.,Murakami, S., Acta Crystallographica Section F: Structural Biology Communications, Vol. 74, No. Pt 11, p. 710-716, 2018/11/01
Structural Basis for Selective Binding of Export Cargoes by Exportin-5., Yamazawa R,Jiko C,Choi S,Park IY,Nakagawa A,Yamashita E,Lee SJ, Structure (London, England : 1993), CELL PRESS, Vol. 26, No. 10, p. 1393-1398.e2, 2018/10
X-ray structural analyses of azide-bound cytochrome c oxidases reveal that the H-pathway is critically important for the proton-pumping activity, Atsuhiro Shimada,Keita Hatano,Hitomi Tadehara,Naomine Yano,Kyoko Shinzawa-Itoh,Eiki Yamashita,Kazumasa Muramoto,Tomitake Tsukihara,Shinya Yoshikawa, Journal of Biological Chemistry, American Society for Biochemistry & Molecular Biology (ASBMB), Vol. 293, No. 38, p. 14868-14879, 2018/09/21
Structure of the γ–ε complex of cyanobacterial F <inf>1</inf> -ATPase reveals a suppression mechanism of the γ subunit on ATP hydrolysis in phototrophs, Murakami, S.,Kondo, K.,Katayama, S.,Hara, S.,Sunamura, E.-I.,Yamashita, E.,Groth, G.,Hisabori, T., Biochemical Journal, Vol. 475, No. 18, p. 2925-2939, 2018/09
Three-dimensional structures of bacteriophage neck subunits are shared in Podoviridae, Siphoviridae and Myoviridae, Iwasaki, T.,Yamashita, E.,Nakagawa, A.,Enomoto, A.,Tomihara, M.,Takeda, S., Genes to Cells, Vol. 23, No. 7, p. 528-536, 2018/07
Structure of bovine cytochrome c oxidase in the ligand-free reduced state at neutral pH, Fangjia Luo,Kyoko Shinzawa-Itoh,Kaede Hagimoto,Atsuhiro Shimada,Satoru Shimada,Eiki Yamashita,Shinya Yoshikawa,Tomitake Tsukihara, Acta Crystallographica Section F: Structural Biology Communications, International Union of Crystallography, Vol. 74, No. 2, p. 92-98, 2018/02/01
Structural basis for the assembly of the Ragulator-Rag GTPase complex, Ryo Yonehara,Shigeyuki Nada,Tomokazu Nakai,Masahiro Nakai,Ayaka Kitamura,Akira Ogawa,Hirokazu Nakatsumi,Keiichi I. Nakayama,Songling Li,Daron M. Standley,Eiki Yamashita,Atsushi Nakagawa,Masato Okada, NATURE COMMUNICATIONS, NATURE PUBLISHING GROUP, Vol. 8, No. 1, 2017/11
Crystal structure of tripartite-type ABC transporter MacB from Acinetobacter baumannii, Ui Okada,Eiki Yamashita,Arthur Neuberger,Mayu Morimoto,Hendrik W. van Veen,Satoshi Murakami, NATURE COMMUNICATIONS, NATURE PUBLISHING GROUP, Vol. 8, No. 1, 2017/11
Structure of bovine cytochrome c oxidase crystallized at a neutral pH using a fluorinated detergent, Fangjia Luo,Kyoko Shinzawa-Itoh,Kaede Hagimoto,Atsuhiro Shimada,Satoru Shimada,Eiki Yamashita,Shinya Yoshikawa,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, INT UNION CRYSTALLOGRAPHY, Vol. 73, No. 7, p. 416-422, 2017/07
A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase, Atsuhiro Shimada,Minoru Kubo,Seiki Baba,Keitaro Yamashita,Kunio Hirata,Go Ueno,Takashi Nomura,Tetsunari Kimura,Kyoko Shinzawa-Itoh,Junpei Baba,Keita Hatano,Yuki Eto,Akari Miyamoto,Hironori Murakami,Takashi Kumasaka,Shigeki Owada,Kensuke Tono,Makina Yabashi,Yoshihiro Yamaguchi,Sachiko Yanagisawa,Miyuki Sakaguchi,Takashi Ogura,Ryo Komiya,Jiwang Yan,Eiki Yamashita,Masaki Yamamoto,Hideo Ago,Shinya Yoshikawa,Tomitake Tsukihara, SCIENCE ADVANCES, AMER ASSOC ADVANCEMENT SCIENCE, Vol. 3, No. 7, 2017/07
Complex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode, Satoru Shimada,Kyoko Shinzawa-Itoh,Junpei Baba,Shimpei Aoe,Atsuhiro Shimada,Eiki Yamashita,Jiyoung Kang,Masaru Tateno,Shinya Yoshikawa,Tomitake Tsukihara, EMBO JOURNAL, WILEY, Vol. 36, No. 3, p. 291-300, 2017/02
The Mg2+-containing Water Cluster of Mammalian Cytochrome c Oxidase Collects Four Pumping Proton Equivalents in Each Catalytic Cycle, Naomine Yano,Kazumasa Muramoto,Atsuhiro Shimada,Shuhei Takemura,Junpei Baba,Hidenori Fujisawa,Masao Mochizuki,Kyoko Shinzawa-Itoh,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, JOURNAL OF BIOLOGICAL CHEMISTRY, AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC, Vol. 291, No. 46, p. 23882-23894, 2016/11
Structural Basis for the Development of SARS 3CL Protease Inhibitors From a Peptide Mimic to an aza-Decaline Scaffold, Kenta Teruya,Yasunao Hattori,Yasuhiro Shimamoto,Kazuya Kobayashi,Akira Sanjoh,Atsushi Nakagawa,Eiki Yamashita,Kenichi Akaji, BIOPOLYMERS, WILEY, Vol. 106, No. 4, p. 391-403, 2016/07
Plant-specific DUF1110 protein from Oryza sativa: expression, purification and crystallization, Kenichi Harada,Eiki Yamashita,Kento Inoue,Koji Yamaguchi,Toshimichi Fujiwara,Atsushi Nakagawa,Tsutomu Kawasaki,Chojiro Kojima, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, INT UNION CRYSTALLOGRAPHY, Vol. 72, p. 480-484, 2016/06
Crystal structures of OprN and OprJ, outer membrane factors of multidrug tripartite efflux pumps of Pseudomonas aeruginosa, Ryo Yonehara,Eiki Yamashita,Atsushi Nakagawa, PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, WILEY-BLACKWELL, Vol. 84, No. 6, p. 759-769, 2016/06
SPring-8 BL44XU, Beamline Designed for Structure Analysis of Large Biological Macromolecular Assemblies, Akifumi Higashiura,Eiki Yamashita,Masato Yoshimura,Kazuya Hasegawa,Yukito Furukawa,Takashi Kumasaka,Go Ueno,Masaki Yamamoto,Tomitake Tsukihara,Atsushi Nakagawa, PROCEEDINGS OF THE 12TH INTERNATIONAL CONFERENCE ON SYNCHROTRON RADIATION INSTRUMENTATION (SRI2015), AMER INST PHYSICS, Vol. 1741, 2016
Utilization of light by fucoxanthin-chlorophyll-binding protein in a marine centric diatom, Chaetoceros gracilis, Tomoko Ishihara,Kentaro Ifuku,Eiki Yamashita,Yuko Fukunaga,Yuri Nishino,Atsuo Miyazawa,Yasuhiro Kashino,Natsuko Inoue-Kashino, PHOTOSYNTHESIS RESEARCH, SPRINGER, Vol. 126, No. 2-3, p. 437-447, 2015/12
Low pH-driven folding of WW45-SARAH domain leads to stabilization of the WW45-Mst2 complex, Jinsue Song,Hye Rim Hong,Eiki Yamashita,Il Yeong Park,Soo Jae Lee, JOURNAL OF BIOCHEMISTRY, OXFORD UNIV PRESS, Vol. 158, No. 3, p. 181-188, 2015/09
Evaluation of transition-state mimics in a superior BACE1 cleavage sequence as peptide-mimetic BACE1 inhibitors, Yasunao Hattori,Kazuya Kobayashi,Ayaka Deguchi,Yukie Nohara,Tomomi Akiyama,Kenta Teruya,Akira Sanjoh,Atsushi Nakagawa,Eiki Yamashita,Kenichi Akaji, BIOORGANIC & MEDICINAL CHEMISTRY, PERGAMON-ELSEVIER SCIENCE LTD, Vol. 23, No. 17, p. 5626-5640, 2015/09
Atomic-scale origins of slowness in the cyanobacterial circadian clock, Jun Abe,Takuya B. Hiyama,Atsushi Mukaiyama,Seyoung Son,Toshifumi Mori,Shinji Saito,Masato Osako,Julie Wolanin,Eiki Yamashita,Takao Kondo,Shuji Akiyama, SCIENCE, AMER ASSOC ADVANCEMENT SCIENCE, Vol. 349, No. 6245, p. 312-316, 2015/07
X-ray structure of cyanide-bound bovine heart cytochrome c oxidase in the fully oxidized state at 2.0 angstrom resolution, Naomine Yano,Kazumasa Muramoto,Masao Mochizuki,Kyoko Shinzawa-Itoh,Eiki Yamashita,Shinya Yoshikawa,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, INT UNION CRYSTALLOGRAPHY, Vol. 71, p. 726-730, 2015/06
A Diffraction-Quality Protein Crystal Processed as an Autophagic Cargo, Hidekazu Tsutsui,Yuka Jinno,Keiko Shoda,Akiko Tomita,Makoto Matsuda,Eiki Yamashita,Hiroyuki Katayama,Atsushi Nakagawa,Atsushi Miyawaki, MOLECULAR CELL, CELL PRESS, Vol. 58, No. 1, p. 186-193, 2015/04
Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s, Jinsue Song,Shingo Kose,Ai Watanabe,Se-Young Son,Saehae Choi,Hyerim Hong,Eiki Yamashita,Il Yeong Park,Naoko Imamoto,Soo Jae Lee, Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, Vol. 71, p. 473-483, 2015/03/01
Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s, Jinsue Song,Shingo Kose,Ai Watanabe,Se-Young Son,Saehae Choi,Hyerim Hong,Eiki Yamashita,Il Yeong Park,Naoko Imamoto,Soo Jae Lee, ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, INT UNION CRYSTALLOGRAPHY, Vol. 71, p. 473-483, 2015/03
Fused-ring structure of decahydroisoquinolin as a novel scaffold for SARS 3CL protease inhibitors, Yasuhiro Shimamoto,Yasunao Hattori,Kazuya Kobayashi,Kenta Teruya,Akira Sanjoh,Atsushi Nakagawa,Eiki Yamashita,Kenichi Akaji, BIOORGANIC & MEDICINAL CHEMISTRY, PERGAMON-ELSEVIER SCIENCE LTD, Vol. 23, No. 4, p. 876-890, 2015/02
Traffic within the Cytochrome b(6)f Lipoprotein Complex: Gating of the Quinone Portal, S. Saif Hasan,Elizabeth A. Proctor,Eiki Yannashita,Nikolay V. Dokholyan,William A. Cramer, BIOPHYSICAL JOURNAL, CELL PRESS, Vol. 107, No. 7, p. 1620-1628, 2014/10
Determination of damage-free crystal structure of an X-ray-sensitive protein using an XFEL, Kunio Hirata,Kyoko Shinzawa-Itoh,Naomine Yano,Shuhei Takemura,Koji Kato,Miki Hatanaka,Kazumasa Muramoto,Takako Kawahara,Tomitake Tsukihara,Eiki Yamashita,Kensuke Tono,Go Ueno,Takaaki Hikima,Hironori Murakami,Yuichi Inubushi,Makina Yabashi,Tetsuya Ishikawa,Masaki Yamamoto,Takashi Ogura,Hiroshi Sugimoto,Jian-Ren Shen,Shinya Yoshikawa,Hideo Ago, NATURE METHODS, NATURE PUBLISHING GROUP, Vol. 11, No. 7, p. 734-U174, 2014/07
X-ray crystal structure of voltage-gated proton channel, Kohei Takeshita,Souhei Sakata,Eiki Yamashita,Yuichiro Fujiwara,Akira Kawanabe,Tatsuki Kurokawa,Yoshifumi Okochi,Makoto Matsuda,Hirotaka Narita,Yasushi Okamura,Atsushi Nakagawa, NATURE STRUCTURAL & MOLECULAR BIOLOGY, NATURE PUBLISHING GROUP, Vol. 21, No. 4, p. 352-U170, 2014/04
Structural basis for the selective nuclear import of the C2H2 zinc-finger protein Snail by importin beta, Saehae Choi,Eiki Yamashita,Noriko Yasuhara,Jinsue Song,Se-Young Son,Young Han Won,Hye Rim Hong,Yoon Sik Shin,Toshihiro Sekimoto,Il Yeong Park,Yoshihiro Yoneda,Soo Jae Lee, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, WILEY-BLACKWELL, Vol. 70, No. 4, p. 1050-1060, 2014/04
Transmembrane signaling and assembly of the cytochrome b(6)f-lipidic charge transfer complex, S. Saif Hasan,Eiki Yamashita,William A. Cramer, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1827, No. 11-12, p. 1295-1308, 2013/11
Crystallization and preliminary X-ray diffraction analysis of human importin beta-Snail zinc finger domain complex, Saehae Choi,Jinsue Song,Se-Young Son,Il Yeong Park,Eiki Yamashita,Soo Jae Lee, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, WILEY-BLACKWELL, Vol. 69, No. 9, p. 1049-1051, 2013/09
Lipid-Induced Conformational Changes within the Cytochrome b(6)f Complex of Oxygenic Photosynthesis, S. Saif Hasan,Jason T. Stofleth,Eiki Yamashita,William A. Cramer, BIOCHEMISTRY, AMER CHEMICAL SOC, Vol. 52, No. 15, p. 2649-2654, 2013/04
A new protein complex promoting the assembly of Rad51 filaments, Hiroyuki Sasanuma,Maki S. Tawaramoto,Jessica P. Lao,Harumi Hosaka,Eri Sanda,Mamoru Suzuki,Eiki Yamashita,Neil Hunter,Miki Shinohara,Atsushi Nakagawa,Akira Shinohara, NATURE COMMUNICATIONS, NATURE PUBLISHING GROUP, Vol. 4, 2013/04
Quinone-dependent proton transfer pathways in the photosynthetic cytochrome b6f complex, S. Saif Hasan,Eiki Yamashita,Danas Baniulis,William A. Cramer, Proceedings of the National Academy of Sciences of the United States of America, Vol. 110, No. 11, p. 4297-4302, 2013/03/12
Structure-Function of the Cytochrome b6f Complex of Oxygenic Photosynthesis, W. A. Cramer,E. Yamashita,D. Baniulis,J. Whitelegge,S. S. Hasan, Encyclopedia of Biological Chemistry: Second Edition, Elsevier Inc., p. 329-334, 2013/02/15
Methods for studying interactions of detergents and lipids with α-helical and β-barrel integral membrane proteins, S. Saif Hasan,Danas Baniulis,Eiki Yamashita,Mariya V. Zhalnina,Stanislav D. Zakharov,Jason T. Stofleth,William A. Cramer, Current Protocols in Protein Science, John Wiley and Sons Inc., Vol. 74, No. 74, 2013
Methods for studying interactions of detergents and lipids with α-helical and β-barrel integral membrane proteins, S. Saif Hasan,Danas Baniulis,Eiki Yamashita,Mariya V. Zhalnina,Stanislav D. Zakharov,Jason T. Stofleth,William A. Cramer, Current Protocols in Protein Science, John Wiley and Sons Inc., No. 74, 2013
Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion, Kenichi Harada,Eiki Yamashita,Atsushi Nakagawa,Takamitsu Miyafusa,Kouhei Tsumoto,Takashi Ueno,Yoshiharu Toyama,Shigeki Takeda, BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, ELSEVIER SCIENCE BV, Vol. 1834, No. 1, p. 284-291, 2013/01
Colicins, O. Sharma,S. D. Zakharov,M. V. Zhalnina,E. Yamashita,W. A. Cramer, Handbook of Biologically Active Peptides, Elsevier Inc., p. 93-100, 2013
Pathways of colicin import: utilization of BtuB, OmpF porin and the TolC drug-export protein, Stanislav D. Zakharov,Onkar Sharma,Mariya Zhalnina,Eiki Yamashita,William A. Cramer, BIOCHEMICAL SOCIETY TRANSACTIONS, PORTLAND PRESS LTD, Vol. 40, No. 6, p. 1463-1468, 2012/12
Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c, Kohei Takeshita,Tohru Tezuka,Yukari Isozaki,Eiki Yamashita,Mamoru Suzuki,Minsoo Kim,Yuji Yamanashi,Tadashi Yamamoto,Atsushi Nakagawa, JOURNAL OF BIOCHEMISTRY, OXFORD UNIV PRESS, Vol. 152, No. 5, p. 487-495, 2012/11
Membrane proteins in four acts: Function precedes structure determination, W. A. Cramer,S. D. Zakharov,S. Saif Hasan,H. Zhang,D. Baniulis,M. V. Zhalnina,G. M. Soriano,O. Sharma,J. C. Rochet,C. Ryan,J. Whitelegge,G. Kurisu,E. Yamashita, METHODS, ACADEMIC PRESS INC ELSEVIER SCIENCE, Vol. 55, No. 4, p. 415-420, 2011/12
Crystallization and preliminary X-ray crystallographic study of the human MST2 SARAH domain, Jinsue Song,Hyerim Hong,Saehae Choi,Yong Hee Lee,Eiki Yamashita,Suk-Chul Bae,Il Yeong Park,Soo Jae Lee, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, WILEY-BLACKWELL, Vol. 67, No. 11, p. 1403-1405, 2011/11
Conservation of Lipid Functions in Cytochrome bc Complexes, S. Saif Hasan,Eiki Yamashita,Christopher M. Ryan,Julian P. Whitelegge,William A. Cramer, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, Vol. 414, No. 1, p. 145-162, 2011/11
The host-binding domain of the P2 phage tail spike reveals a trimeric iron-binding structure, Eiki Yamashita,Atsushi Nakagawa,Junichi Takahashi,Kin-ichi Tsunoda,Seiko Yamada,Shigeki Takeda, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, WILEY-BLACKWELL, Vol. 67, No. 8, p. 837-841, 2011/08
Distinguishing between Cl- and O-2(2-) as the bridging element between Fe3+ and Cu2+ in resting-oxidized cytochrome c oxidase, Michihiro Suga,Naomine Yano,Kazumasa Muramoto,Kyoko Shinzawa-Itoh,Tomoko Maeda,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, WILEY-BLACKWELL, Vol. 67, No. 8, p. 742-744, 2011/08
The Q cycle of cytochrome bc complexes: A structure perspective, William A. Cramer,S. Saif Hasan,Eiki Yamashita, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1807, No. 7, p. 788-802, 2011/07
Crystal Structure of the Cytoplasmic Phosphatase and Tensin Homolog (PTEN)-like Region of Ciona intestinalis Voltage-sensing Phosphatase Provides Insight into Substrate Specificity and Redox Regulation of the Phosphoinositide Phosphatase Activity, Makoto Matsuda,Kohei Takeshita,Tatsuki Kurokawa,Souhei Sakata,Mamoru Suzuki,Eiki Yamashita,Yasushi Okamura,Atsushi Nakagawa, JOURNAL OF BIOLOGICAL CHEMISTRY, AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC, Vol. 286, No. 26, p. 23368-23377, 2011/07
Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1), Kohei Takeshita,Isao Suetake,Eiki Yamashita,Michihiro Suga,Hirotaka Narita,Atsushi Nakagawa,Shoji Tajima, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, NATL ACAD SCIENCES, Vol. 108, No. 22, p. 9055-9059, 2011/05
Selective nuclear export mechanism of small RNAs, Soo Jae Lee,Chimari Jiko,Eiki Yamashita,Tomitake Tsukihara, CURRENT OPINION IN STRUCTURAL BIOLOGY, CURRENT BIOLOGY LTD, Vol. 21, No. 1, p. 101-108, 2011/02
Elucidation of the function based on the whole structure of rat liver vault, the largest ribonucleo-protein particle, Hideaki Tanaka,Koji Kato,Tomoyuki Sumizawa,Eiki Yamashita, Seikagaku, Vol. 83, No. 5, p. 392-395, 2011
Bovine cytochrome c oxidase structures enable O-2 reduction with minimization of reactive oxygens and provide a proton-pumping gate, Kazumasa Muramoto,Kazuhiro Ohta,Kyoko Shinzawa-Itoh,Katsumasa Kanda,Maki Taniguchi,Hiroyuki Nabekura,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, NATL ACAD SCIENCES, Vol. 107, No. 17, p. 7740-7745, 2010/04
X-ray structure of the NO-bound Cu-B in bovine cytochrome c oxidase, Kazuhiro Ohta,Kazumasa Muramoto,Kyoko Shinzawa-Itoh,Eiki Yamashita,Shinya Yoshikawa,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, WILEY-BLACKWELL, Vol. 66, No. 3, p. 251-253, 2010/03
A High-Resolution Structure of the Pre-microRNA Nuclear Export Machinery, Chimari Okada,Eiki Yamashita,Soo Jae Lee,Satoshi Shibata,Jun Katahira,Atsushi Nakagawa,Yoshihiro Yoneda,Tomitake Tsukihara, SCIENCE, AMER ASSOC ADVANCEMENT SCIENCE, Vol. 326, No. 5957, p. 1275-1279, 2009/11
A description of the structural determination procedures of a gap junction channel at 3.5 angstrom resolution, Michihiro Suga,Shoji Maeda,So Nakagawa,Eiki Yamashita,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, WILEY-BLACKWELL, Vol. 65, No. 8, p. 758-766, 2009/08
Structure of the connexin 26 gap junction channel at 3.5 A resolution., Shoji Maeda,So Nakagawa,Michihiro Suga,Eiki Yamashita,Atsunori Oshima,Yoshinori Fujiyoshi,Tomitake Tsukihara, Nature, Vol. 458, No. 7238, p. 597-602, 2009/04/02
Structure-Function, Stability, and Chemical Modification of the Cyanobacterial Cytochrome b(6)f Complex from Nostoc sp PCC 7120, Danas Baniulis,Eiki Yamashita,Julian P. Whitelegge,Anna I. Zatsman,Michael P. Hendrich,S. Saif Hasan,Christopher M. Ryan,William A. Cramer, JOURNAL OF BIOLOGICAL CHEMISTRY, AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC, Vol. 284, No. 15, p. 9861-9869, 2009/04
X-ray crystal structural determination of rat vault, a large nucleoprotein complex at 3.5Å resolution., H. Tanaka,K. Kato,E. Yamashita,T. Sumizawa,Y. Zhou,M. Yao,K. Iwasaki,M. Yoshimura,T. Tsukihara, 2009/03
A vault ribonucleoprotein particle exhibiting 39-fold dihedral symmetry (vol 64, pg 525, 2008), Koji Kato,Hideaki Tanaka,Tomoyuki Sumizawa,Masato Yoshimura,Eiki Yamashita,Kenji Iwasaki,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, WILEY-BLACKWELL PUBLISHING, INC, Vol. 65, No. 3, p. 301-301, 2009/03
A peroxide bridge between Fe and Cu ions in the O-2 reduction site of fully oxidized cytochrome c oxidase could suppress the proton pump, Hiroshi Aoyama,Kazumasa Muramoto,Kyoko Shinzawa-Itoh,Kunio Hirata,Eiki Yamashita,Tomitake Tsukihara,Takashi Ogura,Shinya Yoshikawa, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, NATL ACAD SCIENCES, Vol. 106, No. 7, p. 2165-2169, 2009/02
The Structure of Rat Liver Vault at 3.5 Angstrom Resolution, Hideaki Tanaka,Koji Kato,Eiki Yamashita,Tomoyuki Sumizawa,Yong Zhou,Min Yao,Kenji Iwasaki,Masato Yoshimura,Tomitake Tsukihara, Science, Vol. 49, No. Supplement 1, 2009/01
[Development of data processing technique for diffraction data collection from micro-crystals]., Nakagawa, A.,Yamashita, E.,Yoshimura, M.,Suzuki, M., Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme, Vol. 54, No. 12 Suppl, p. 1496-1498, 2009
The Structure of Rat Liver Vault at 3.5 Angstrom Resolution, Hideaki Tanaka,Koji Kato,Eiki Yamashita,Tomoyuki Sumizawa,Yong Zhou,Min Yao,Kenji Iwasaki,Masato Yoshimura,Tomitake Tsukihara, SCIENCE, AMER ASSOC ADVANCEMENT SCIENCE, Vol. 323, No. 5912, p. 384-388, 2009/01
Cytochrome b6f Complex, Colon Structure, Spectroscopy, and Function of Heme cn n-Side Electron and Proton Transfer Reactions, William A. Cramer,Danas Baniulis,Eiki Yamashita,Huamin Zhang,Anna I. Zatsman,Mike P. Hendrich, Photosynthetic Protein Complexes: A Structural Approach, Wiley-VCH Verlag GmbH & Co. KGaA, p. 155-179, 2008/09/05
Structural analysis of Arabidopsis CnfU protein: An iron-sulfur cluster biosynthetic scaffold in chloroplasts, Toshiki Yabe,Eiki Yamashita,Akihiro Kikuchi,Kozo Morimoto,Atsushi Nakagawa,Tomitake Tsukihara,Masato Nakai, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 381, No. 1, p. 160-173, 2008/08
Crystal structures of the OmpF porin: function in a colicin translocon, Eiki Yamashita,Mariya V. Zhalnina,Stanislav D. Zakharov,Onkar Sharma,William A. Cramer, EMBO JOURNAL, WILEY-BLACKWELL, Vol. 27, No. 15, p. 2171-2180, 2008/08
S11.27 X-ray structural analysis of zinc/cadmium inhibitory site in bovine heart cytochrome c oxidase, Kazumasa Muramoto,Kazunori Maeda,Takeshi Takahashi,Kunio Hirata,Kyoko Shinzawa-Itoh,Tomoko Maeda,Shinji Yoko-o,Eiki Yamashita,Hiroshi Aoyama,Tomitake Tsukihara,Shinya Yoshikawa, Biochimica et Biophysica Acta (BBA) - Bioenergetics, Elsevier {BV}, Vol. 1777, p. S71-S72, 2008/07
S11.17 A peroxide bridge between the two metals in the dinuclear center of the fully oxidized cytochrome c oxidase, Hiroshi Aoyama,Kazumasa Muramoto,Kunio Hirata,Michihiro Suga,Eiki Yamashita,Kyoko Shinzawa-Itoh,Takashi Ogura,Tomitake Tsukihara,Shinya Yoshikawa, Biochimica et Biophysica Acta (BBA) - Bioenergetics, Elsevier {BV}, Vol. 1777, 2008/07
A vault ribonucleoprotein particle exhibiting 39-fold dihedral symmetry, Koji Kato,Hideaki Tanaka,Tomoyuki Sumizawa,Masato Yoshimura,Eiki Yamashita,Kenji Iwasaki,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, BLACKWELL PUBLISHING, Vol. 64, No. 5, p. 525-531, 2008/05
Structure of human monoamine oxidase A at 2.2-angstrom resolution: The control of opening the entry for substrates/inhibitors, Se-Young Son,Achun Ma,Youhei Kondou,Masato Yoshimura,Eiki Yamashita,Tomitake Tsukihara, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, NATL ACAD SCIENCES, Vol. 105, No. 15, p. 5739-5744, 2008/04
On the structural role of the aromatic residue environment of the chlorophyll a in the cytochrome b(6)f complex, Jiusheng Yan,Naranbaatar Dashdorj,Danas Baniulis,Eiki Yamashita,Sergei Savikhin,William A. Cramer, BIOCHEMISTRY, AMER CHEMICAL SOC, Vol. 47, No. 12, p. 3654-3661, 2008/03
The structure of melon necrotic spot virus determined at 2.8 angstrom resolution, Yasunobu Wada,Hideaki Tanaka,Eiki Yamashita,Chikako Kubo,Tamaki Ichiki-Uehara,Eiko Nakazono-Nagaoka,Toshihiro Omura,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, BLACKWELL PUBLISHING, Vol. 64, No. 1, p. 8-13, 2008/01
Ultrafast optical pump-probe studies of the cytochrome b(6)f complex in solution and crystalline states, Naranbaatar Dashdorj,Eiki Yamashita,John Schaibley,William A. Cramer,Sergei Savikhin, JOURNAL OF PHYSICAL CHEMISTRY B, AMER CHEMICAL SOC, Vol. 111, No. 51, p. 14405-14410, 2007/12
Structure of the complex of the colicin E2 R-domain and its BtuB receptor - The outer membrane colicin translocon, Onkar Sharma,Eiki Yamashita,Mariya V. Zhalnina,Stanislav D. Zakharov,Kirill A. Datsenko,Barry L. Wanner,William A. Cramer, JOURNAL OF BIOLOGICAL CHEMISTRY, AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC, Vol. 282, No. 32, p. 23163-23170, 2007/08
Structure of the cytochrome b(6)f complex: Quinone analogue inhibitors as ligands of heme c(n), E. Yamashita,H. Zhang,W. A. Cramer, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 370, No. 1, p. 39-52, 2007/06
The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses, Fusamichi Akita,Khoon Tee Chong,Hideaki Tanaka,Eiki Yamashita,Naoyuki Miyazaki,Yuichiro Nakaishi,Mamoru Suzuki,Kazunori Namba,Yasuko Ono,Tomitake Tsukihara,Atsushi Nakagawa, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 368, No. 5, p. 1469-1483, 2007/05
A histidine residue acting as a controlling site for dioxygen reduction and proton pumping by cytochrome c oxidase, Kazumasa Muramoto,Kunio Hirata,Kyoko Shinzawa-Itoh,Shinji Yoko-o,Eiki Yamashita,Hiroshi Aoyama,Tomitake Tsukihara,Shinya Yoshikawa, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, NATL ACAD SCIENCES, Vol. 104, No. 19, p. 7881-7886, 2007/05
Structures and physiological roles of 13 integral lipids of bovine heart cytochrome c oxidase, Kyoko Shinzawa-Itoh,Hiroshi Aoyama,Kazumasa Muramoto,Hirohito Terada,Tsuyoshi Kurauchi,Yoshiki Tadehara,Akiko Yamasaki,Takashi Sugimura,Sadamu Kurono,Kazuo Tsujimoto,Tsunehiro Mizushima,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, EMBO JOURNAL, NATURE PUBLISHING GROUP, Vol. 26, No. 6, p. 1713-1725, 2007/03
Beamline for biological macromolecular assemblies (BL44XU) at SPring-8, Masato Yoshimura,Eiki Yamashita,Mamoru Suzuki,Masaki Yamamoto,Shinya Yoshikawa,Tomitake Tsukihara,Atsushi Nakagawa, SYNCHROTRON RADIATION INSTRUMENTATION, PTS 1 AND 2, AMER INST PHYSICS, Vol. 879, p. 1916-+, 2007
In meso structure of the cobalamin transporter, BtuB, at 1.95 angstrom resolution, V. Cherezov,E. Yamashita,W. Liu,M. Zhalnina,W. A. Cramer,M. Caffrey, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 364, No. 4, p. 716-734, 2006/12
Crystal structure of the DsbB-DsbA complex reveals a mechanism of disulfide bond generation, Kenji Inaba,Satoshi Murakami,Mamoru Suzuki,Atsushi Nakagawa,Eiki Yamashita,Kengo Okada,Koreaki Ito, CELL, CELL PRESS, Vol. 127, No. 4, p. 789-801, 2006/11
Crystal structures of a multidrug transporter reveal a functionally rotating mechanism, Satoshi Murakami,Ryosuke Nakashima,Eiki Yamashita,Takashi Matsumoto,Akihito Yamaguchi, NATURE, NATURE PUBLISHING GROUP, Vol. 443, No. 7108, p. 173-179, 2006/09
The asymmetric IscA homodimer with an exposed [2Fe-2S] cluster suggests the structural basis of the fe-S cluster biosynthetic scaffold, Kozo Morimoto,Eiki Yamashita,Youhei Kondou,Soo Jae Lee,Fumio Arisaka,Tomitake Tsukihara,Masato Nakai, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 360, No. 1, p. 117-132, 2006/06
Crystal structures of the catalytic domain of human stromelysin-1 (MMP-3) and collagenase-3 (MMP-13) with a hydroxamic acid inhibitor SM-25453, T Kohno,H Hochigai,E Yamashita,T Tsukihara,M Kanaoka, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, ACADEMIC PRESS INC ELSEVIER SCIENCE, Vol. 344, No. 1, p. 315-322, 2006/05
Absolute configuration of the hydroxyfarnesylethyl group of haem A, determined by X-ray structural analysis of bovine heart cytochrome c oxidase using methods applicable at 2.8 angstrom resolution, E Yamashita,H Aoyama,M Yao,K Muramoto,K Shinzawa-Itoh,S Yoshikawa,T Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, BLACKWELL PUBLISHING, Vol. 61, No. 10, p. 1373-1377, 2005/10
Structure of the central hub of bacteriophage Mu baseplate determined by X-ray crystallography of gp44, Y Kondou,D Kitazawa,S Takeda,Y Tsuchiya,E Yamashita,M Mizuguchi,K Kawano,T Tsukihara, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 352, No. 4, p. 976-985, 2005/09
Crystal structure of human T-protein of glycine cleavage system at 2.0 angstrom resolution and its implication for understanding non-ketotic hyperglycinemia, K Okamura-Ikeda,H Hosaka,M Yoshimura,E Yamashita,S Toma,A Nakagawa,K Fujiwara,Y Motokawa,H Taniguchi, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 351, No. 5, p. 1146-1159, 2005/09
Expression and molecular characterization of spherical particles derived from the genome of the hyperthermophilic euryarchaeote Pyrococcus furiosus, K Namba,K Hagiwara,H Tanaka,Y Nakaishi,KT Chong,E Yamashita,GE Armah,Y Ono,Y Ishino,T Omura,T Tsukihara,A Nakagawa, JOURNAL OF BIOCHEMISTRY, OXFORD UNIV PRESS, Vol. 138, No. 2, p. 193-199, 2005/08
Crystallization and preliminary X-ray analysis of gene product 44 from bacteriophage Mu, Y Kondou,D Kitazawa,S Takeda,E Yamashita,M Mizuguchi,K Kawano,T Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, BLACKWELL PUBLISHING, Vol. 61, No. 1, p. 104-105, 2005/01
Structure of rat monoamine oxidase A and its specific recognitions for substrates and inhibitors, JC Ma,M Yoshimura,E Yamashita,A Nakagawa,A Ito,T Tsukihara, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, Vol. 338, No. 1, p. 103-114, 2004/04
Crystallization and preliminary crystallographic analysis of rat monoamine oxidase A complexed with clorgyline, JC Ma,F Kubota,M Yoshimura,E Yamashita,A Nakagawa,A Ito,T Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, BLACKWELL MUNKSGAARD, Vol. 60, No. 2, p. 317-319, 2004/02
Scaling of one-shot oscillation images with a reference data set, K Hirata,E Yamashita,H Aoyama,K Muramoto,S Yoshikawa,T Tsukihara, JOURNAL OF SYNCHROTRON RADIATION, BLACKWELL MUNKSGAARD, Vol. 11, No. 1, p. 60-63, 2004/01
The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process, T Tsukihara,K Shimokata,Y Katayama,H Shimada,K Muramoto,H Aoyoma,M Mochizuki,K Shinzawa-Itoh,E Yamashita,M Yao,Y Ishimura,S Yoshikawa, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, NATL ACAD SCIENCES, Vol. 100, No. 26, p. 15304-15309, 2003/12
The structure of importin-beta bound to SREBP-2: Nuclear import of a transcription factor, SJ Lee,T Sekimoto,E Yamashita,E Nagoshi,A Nakagawa,N Imamoto,M Yoshimura,H Sakai,KT Chong,T Tsukihara,Y Yoneda, SCIENCE, AMER ASSOC ADVANCEMENT SCIENCE, Vol. 302, No. 5650, p. 1571-1575, 2003/11
Crystallization and preliminary crystallographic analysis of the importin-beta-SRERP-2 complex, SJ Lee,T Sekimoto,E Yamashita,E Nagoshi,A Nakagawa,H Tanaka,Y Yoneda,T Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, BLACKWELL MUNKSGAARD, Vol. 59, No. 10, p. 1866-1868, 2003/10
Crystal structure of bacterial multidrug efflux transporter AcrB, S Murakami,R Nakashima,E Yamashita,A Yamaguchi, NATURE, NATURE PUBLISHING GROUP, Vol. 419, No. 6907, p. 587-593, 2002/10
Trichromatic concept optimizes MAD experiments in synchrotron X-ray crystallography, T Kumasaka,M Yamamoto,E Yamashita,H Moriyama,T Ueki, STRUCTURE, CELL PRESS, Vol. 10, No. 9, p. 1205-1210, 2002/09
The 1.55 angstrom resolution structure of Nicotiana alata S-F11-RNase associated with gametophytic self-incompatibility, K Ida,S Norioka,M Yamamoto,T Kumasaka,E Yamashita,E Newbigin,AE Clarke,F Sakiyama,M Sato, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS LTD, Vol. 314, No. 1, p. 103-112, 2001/11
Intermonomer interactions in dimer of bovine heart cytochrome c oxidase, SJ Lee,E Yamashita,T Abe,Y Fukumoto,T Tsukihara,K Shinzawa-Itoh,H Ueda,S Yoshikawa, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, MUNKSGAARD INT PUBL LTD, Vol. 57, No. 7, p. 941-947, 2001/07
Optimization of the energy constant of the methionine (S delta-C epsilon) bond for X-PLOR refinement of protein structure, M Odoko,M Yao,E Yamashita,R Nakashima,K Hirata,H Aoyama,K Muramoto,K Shinzawa-Itoh,S Yoshikawa,T Tsukihara, JOURNAL OF APPLIED CRYSTALLOGRAPHY, MUNKSGAARD INT PUBL LTD, Vol. 34, No. 1, p. 80-81, 2001/02
Prospects for X-ray crystal structure analysis of selenoproteins with SPring-8 synchrotron radiation, M Yamamoto,T Kumasaka,E Yamashita,H Moriyama,M Sato,T Ueki, JOURNAL OF HEALTH SCIENCE, PHARMACEUTICAL SOC JAPAN, Vol. 46, No. 6, p. 426-429, 2000/12
Crystal structure of N-carbamyl-D-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases, T Nakai,T Hasegawa,E Yamashita,M Yamamoto,T Kumasaka,T Ueki,H Nanba,Y Ikenaka,S Takahashi,M Sato,T Tsukihara, STRUCTURE WITH FOLDING & DESIGN, CURRENT BIOLOGY LTD, Vol. 8, No. 7, p. 729-737, 2000/07
X-ray structure of azide-bound fully oxidized cytochrome c oxidase from bovine heart at 2.9 angstrom resolution, MJ Fei,E Yamashita,N Inoue,M Yao,H Yamaguchi,T Tsukihara,K Shinzawa-Ito,R Nakashima,S Yoshikawa, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, MUNKSGAARD INT PUBL LTD, Vol. 56, No. 5, p. 529-535, 2000/05
X-ray structure of beta-carbonic anhydrase from the red alga, Porphyridium purpureum, reveals a novel catalytic site for CO2 hydration, S Mitsuhashi,T Mizushima,E Yamashita,M Yamamoto,T Kumasaka,H Moriyama,T Ueki,S Miyachi,T Tsukihara, JOURNAL OF BIOLOGICAL CHEMISTRY, AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC, Vol. 275, No. 8, p. 5521-5526, 2000/02
Crystallization and preliminary X-ray diffraction studies of a beta-carbonic anhydrase from the red alga Porphyridium purpureum, S Mitsuhashi,T Mizushima,E Yamashita,S Miyachi,T Tsukihara, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, MUNKSGAARD INT PUBL LTD, Vol. 56, No. 2, p. 210-211, 2000/02
Structure analysis of bovine heart cytochrome c oxidase at 2.8 angstrom resolution, T Tomizaki,E Yamashita,H Yamaguchi,H Aoyama,T Tsukihara,K Shinzawa-Itoh,R Nakashima,R Yaono,S Yoshikawa, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, MUNKSGAARD INT PUBL LTD, Vol. 55, No. 1, p. 31-45, 1999/01
Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase, S Yoshikawa,K Shinzawa-Itoh,R Nakashima,R Yaono,E Yamashita,N Inoue,M Yao,MJ Fei,CP Libeu,T Mizushima,H Yamaguchi,T Tomizaki,T Tsukihara, SCIENCE, AMER ASSOC ADVANCEMENT SCIENCE, Vol. 280, No. 5370, p. 1723-1729, 1998/06
Crystallization of bovine heart mitochondrial cytochrome c oxidase for X-ray diffraction at atomic resolution (2.8 angstrom), K Shinzawa-Itoh,R Yaono,R Nakashima,H Aoyama,E Yamashita,T Tomizaki,T Tsukihara,S Yoshikawa, OXYGEN HOMEOSTASIS AND ITS DYNAMICS, SPRINGER-VERLAG TOKYO, Vol. 1, p. 98-101, 1998
STUDIES ON THE MAD METHOD AT THE RIKEN BEAMLINE I BL45XU, Yamamoto, M,Kumasaka, T,Yamashita, E, SPring-8 Research Frontiers, Vol. 1997-1998, p. 6-8, 1998
The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 angstrom, T Tsukihara,H Aoyama,E Yamashita,T Tomizaki,H Yamaguchi,K ShinzawaItoh,R Nakashima,R Yaono,S Yoshikawa, SCIENCE, AMER ASSOC ADVANCEMENT SCIENCE, Vol. 272, No. 5265, p. 1136-1144, 1996/05
Crystallization of bovine heart mitochondrial cytochrome c oxidase for X-ray diffraction at atomic resolution(2.8 Å), Kyoko Shinzawa-Itoh,Rieko Yaono,Ryosuke Nakajima,Hiroshi Aoyama,Eiki Yamashita,Takashi Tomizaki,Tomitake Tsukihara,Shinya Yoshikawa, Keio Journal of Medicine, Vol. 45, p. S46-S54, 1996
STRUCTURES OF METAL SITES OF OXIDIZED BOVINE HEART CYTOCHROME-C-OXIDASE AT 2.8 ANGSTROM, T TSUKIHARA,H AOYAMA,E YAMASHITA,T TOMIZAKI,H YAMAGUCHI,K SHINZAWAITOH,R NAKASHIMA,R YAONO,S YOSHIKAWA, SCIENCE, AMER ASSOC ADVAN SCIENCE, Vol. 269, No. 5227, p. 1069-1074, 1995/08
EFFECTS OF ETHYLENEGLYCOL CHAIN-LENGTH OF DODECYL POLYETHYLENEGLYCOL MONOETHER ON THE CRYSTALLIZATION OF BOVINE HEART CYTOCHROME-C-OXIDASE, K SHINZAWAITOH,H UEDA,S YOSHIKAWA,H AOYAMA,E YAMASHITA,T TSUKIHARA, JOURNAL OF MOLECULAR BIOLOGY, ACADEMIC PRESS (LONDON) LTD, Vol. 246, No. 5, p. 572-575, 1995/03
X-ray crystal structural analysis of biological assembly, Tsukihara, T.,Morimoto, Y.,Yamashita, E., Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme, Vol. 38, No. 7, p. 1247-1253, 1993

Misc.

Development of a novel purification method and structural analysis of mammalian FoF1ATP synthase, 慈幸千真理,中野敦樹,三角裕子,山下栄樹,栗栖源嗣,森本幸生,月原冨武,横山謙,GERLE Christoph, KURNS-EKR (Web), No. 19, 2024
ヘテロ三量体型多剤排出トランスポーターMuxBCの構造解析, 堤研太,比嘉悠貴,中川敦史,山下栄樹, 日本結晶学会年会講演要旨集, Vol. 2023, 2023
多剤排出トランスポーターMexBの中性付近の結晶構造解析, 上田雄士,米原涼,池田悦子,中川敦史,山下栄樹, 日本結晶学会年会講演要旨集, Vol. 2023, 2023
がん進展に関わるCDCP1の結晶構造解析, 松田真,山下栄樹,梶原健太郎,赤松香奈子,杉本楓,岡田雅人,中川敦史, 日本結晶学会年会講演要旨集, Vol. 2023, 2023
Three-dimensional structure of bacteriophage Mu tail fiber and structural comparison with the other tail fiber of Mu phage, 森有希奈,山下栄樹,中川敦史,武田茂樹, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 45th, 2022
緑膿菌由来膜融合タンパク質MexXの機能解明に向けた構造解析, 上田雄士,荒谷剛史,米原涼,池田悦子,堤研太,中川敦史,山下栄樹, 日本結晶学会年会講演要旨集, Vol. 2022, 2022
チトクロムc酸化酵素の構造多型結晶での反応中間体の構造決定, 島田敦広,原史剛,江藤勇樹,伊藤(新澤)恭子,山下栄樹,村本和優,吉川信也,月原冨武,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2022, 2022
Atomic Mechanisms of Clock Protein KaiC Orchestrating Circadian Oscillation, 古池美彦,古池美彦,向山厚,向山厚,山下栄樹,近藤孝男,秋山修志,秋山修志, 時間生物学, Vol. 28, No. 2, 2022
大阪大学蛋白質研究所BL44XU, 山下栄樹,櫻井啓介,吉村政人,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム(Web), Vol. 35th, 2022
SPring-8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状, 櫻井啓介,山下栄樹,吉村政人,長谷川和也,村上博則,熊坂崇,古川行人,上野剛,山本雅貴,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム(Web), Vol. 35th, 2022
Theoretical analysis of optical properties and light harvesting mechanisms in far-red adapted A. marina photosystem I., 木村明洋,鬼頭宏任,青田俊道,浜口祐,米倉功治,川上恵典,新沢(伊藤)恭子,井上(菓子野)名津子,伊福健太郎,菓子野康浩,山下栄樹,伊藤繁, 日本物理学会講演概要集(CD-ROM), Vol. 77, No. 1, 2022
藍藻の概日リズムを制御する時計タンパク質KaiCのアロステリー, 古池美彦,古池美彦,向山厚,向山厚,欧陽東彦,伊藤(三輪)久美子,SIMON Damien,SIMON Damien,山下栄樹,近藤孝男,秋山修志,秋山修志, 日本結晶学会年会講演要旨集, Vol. 2021, 2021
Second cytochrome c binding structure of the bovine heart cytochrome c oxidase, 伊藤(新澤)恭子,青江新平,島田悟,馬場淳平,藤本光輝,島田敦広,山下栄樹,吉川信也,月原冨武,月原冨武,村本和優, 日本生体エネルギー研究会討論会講演要旨集, Vol. 47th (CD-ROM), 2021
Core Allosteric Regulation in Cyanobacterial Circadian Clock Protein KaiC, FURUIKE Yoshihiko,FURUIKE Yoshihiko,MUKAIYAMA Atsushi,MUKAIYAMA Atsushi,OUYANG Dongyan,ITO-MIWA Kumiko,DAMIEN Simon,DAMIEN Simon,YAMASHITA Eiki,KONDO Takao, 生物物理(Web), Vol. 61, No. Supplement 1-2, 2021
【立体構造から読み解く多剤耐性のメカニズム】緑膿菌由来の2つの膜を貫く巨大な排出ポンプMexAB-OprMの構造, 堤研太,山下栄樹, ファルマシア, (公社)日本薬学会, Vol. 56, No. 6, p. 504-508, 2020/06
CDCP1細胞外領域の構造基盤の解明, 杉本楓,赤松香奈子,松田真,梶原健太郎,山下栄樹,中川敦史,岡田雅人, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 43rd, 2020
The 1.3 Å resolution structure of bovine mitochondrial respiratory oxygen reductase suggests a dimerization mechanism, SHINZAWA-ITOH Kyoko,HATANAKA Miki,FUJITA Kazuya,YANO Naomine,OGASAWARA Yumi,IWATA Jun,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya,MURAMOTO Kazumasa, 生物物理(Web), Vol. 60, No. Supplement 1-2, 2020
O2-activation and unidirectional proton-pump mechanisms of cytochrome c oxidase elucidated by X-ray structures of its catalytic intermediates, SHIMADA Atsuhiro,ETOH Yuki,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,MURAMOTO Kazumasa,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 日本蛋白質科学会年会プログラム・要旨集, Vol. 20th (Web), 2020
The 1.3 Å resolution structure of bovine cytochrome c oxidase suggests a dimerization mechanism, 伊藤新澤恭子,畑中美紀,藤田和也,矢野直峰,小笠原由美,岩田淳,山下栄樹,月原冨武,月原冨武,吉川信也,村本和優, 日本生体エネルギー研究会討論会講演要旨集, Vol. 46th, 2020
ウシチトクロム酸化酵素の活性型モノマー構造, 伊藤恭子[新澤],杉村高志,御前智則,蓼原吉輝,山本省吾,矢野直峰,花田真,中川徹也,上根滋史,山田聖,青山浩,山下栄樹,月原富武,吉川信也,村本和優, 日本生化学会大会プログラム・講演要旨集, (公社)日本生化学会, Vol. 92回, p. [2T06m-05], 2019/09
クライオ電子顕微鏡による多剤排出ポンプ複合体MexAB-OprMの構造解析(The wild-type structures of MexAB-OprM multidrug efflux pump revealed by cryo-electron microscopy), Tsutsumi Kenta,Yonehara Ryo,Ishizaka-Ikeda Etsuko,Miyazaki Naoyuki,Maeda Shintaro,Iwasaki Kenji,Nakagawa Atsushi,Yamashita Eiki, 生物物理, (一社)日本生物物理学会, Vol. 59, No. Suppl.1-2, p. S383-S383, 2019/08
ウシミトコンドリア由来酸素還元酵素の活性型の単量体構造(Monomeric structure of an active form of respiratory oxygen reductase from bovine mitochondria), Shinzawa-Itoh Kyoko,Sugimura Takashi,Misaki Tomonori,Tadehara Yoshiki,Yamamoto Shogo,Hanada Makoto,Yano Naomine,Nakagawa Tetsuya,Uene Shigefumi,Yamada Takara,Aoyama Hiroshi,Yamashita Eiki,Tsukihara Tomitake,Yoshikawa Shinya,Muramoto Kazumasa, 生物物理, (一社)日本生物物理学会, Vol. 59, No. Suppl.1-2, p. S392-S392, 2019/08
Structural Diversity of KaiC Hexamer in Cyanobacterial Circadian Clock, FURUIKE Yoshihiko,FURUIKE Yoshihiko,MUKAIYAMA Atsushi,MUKAIYAMA Atsushi,YAMASHITA Eiki,KONDO Takao,AKIYAMA Shuji,AKIYAMA Shuji, 生物物理(Web), Vol. 59, No. Supplement 1-2, 2019
イネの細胞膜共受容体OsCERK1および受容体型細胞質キナーゼOsRLCK185のキナーゼドメインの結晶構造解析, 原田健一,山口公志,山下栄樹,新家粧子,中居由依奈,児玉高志,藤原敏道,中川敦史,川崎努,児嶋長次郎,児嶋長次郎, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 42nd, 2019
Monomeric structure of an active form of respiratory oxygen reductase from bovine mitochondria, SHINZAWA-ITOH Kyoko,SUGIMURA Takashi,MISAKI Tomonori,TADEHARA Yoshiki,YAMAMOTO Shogo,HANADA Makoto,YANO Naomine,NAKAGAWA Tetsuya,UENE Shigefumi,YAMADA Takara,AOYAMA Hiroshi,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya,MURAMOTO Kazumasa, 生物物理(Web), Vol. 59, No. Supplement 1-2, 2019
Allosteric Regulation Designed in Clock Protein KaiC, FURUIKE Yoshihiko,FURUIKE Yoshihiko,MUKAIYAMA Atsushi,MUKAIYAMA Atsushi,YAMASHITA Eiki,KONDO Takao,AKIYAMA Shuji,AKIYAMA Shuji, 生物物理(Web), Vol. 58, No. Supplement 1-2, 2018
Conformational rearrangements of the C1 ring in KaiC measure the timing of assembly with KaiB via a conformational selection mechanism, MUKAIYAMA Atsushi,MUKAIYAMA Atsushi,FURUIKE Yoshihiko,FURUIKE Yoshihiko,YAMASHITA Eiki,KONDO Takao,AKIYAMA Shuji,AKIYAMA Shuji, 生物物理(Web), Vol. 58, No. Supplement 1-2, 2018
ジャガイモの14-3-3タンパク質St14fの結晶構造解析, 原田健一,新家粧子,山下栄樹,田岡健一郎,辻寛之,藤原敏道,中川敦史,児嶋長次郎,児嶋長次郎, 日本蛋白質科学会年会プログラム・要旨集, Vol. 18th, 2018
構造解析における動的ゆらぎと構造多型の区別-CO結合還元型チトクロム酸化酵素のX線結晶構造解析の場合, 島田敦広,矢野直峰,山下栄樹,廣本武史,伊藤(新澤)恭子,吉川信也,月原冨武,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2018, 2018
生体分子モーターが力を発生させているところを見る静的・動的X線結晶構造解析による哺乳類F1‐ATPaseの回転力発生機構の分析, 鈴木俊治,鈴木俊治,鈴木俊治,飯田直也,平田邦生,山下栄樹,馬場清喜,熊坂崇,遠藤斗志也,久堀徹,吉田賢右,野地博行, 日本生体エネルギー研究会討論会講演要旨集, Vol. 43rd, 2017/12/05
Ragulator‐Rag GTPase複合体形成の構造基盤, 中井昌弘,岡田雅人,名田茂之,小川輝,北村絢香,中井友和,中川敦史,山下栄樹,米原涼,中山敬一,中津海洋一, 日本生化学会大会(Web), Vol. 2017年度, p. [1P-0130], 2017/12
生体分子モーターが力を発生させているところを見る―時分割動的構造解析による哺乳類F1‐ATPaseのリン酸解離駆動の回転力発生機構の分析―, 鈴木俊治,鈴木俊治,鈴木俊治,平田邦生,山下栄樹,飯田直也,遠藤斗志也,久堀徹,吉田賢右,野地博行, 日本結晶学会年会講演要旨集, Vol. 2017, 2017/11/23
リン酸化および脱リン酸化した時計タンパク質KaiCの結晶構造解析, 古池美彦,古池美彦,向山厚,向山厚,山下栄樹,近藤孝男,秋山修志,秋山修志, 日本結晶学会年会講演要旨集, Vol. 2017, 2017/11/23
角度分割・時分割X線結晶構造解析による、哺乳類F1-ATPaseのリン酸解離駆動の回転力発生機構の分析(Molecular mechanism of Phosphate-driven rotation of mammalian F1 by the angle-divided and time-resolved X-ray crystallographic studies), Suzuki Toshiharu,Hirata Kunio,Yamashita Eiki,Iida Naoya,Endo Toshiya,Hisabori Toru,Yoshida Masasuke,Noji Hiroyuki, 生物物理, (一社)日本生物物理学会, Vol. 57, No. Suppl.1-2, p. S220-S220, 2017/08
温度補償能を欠損した時計タンパク質KaiC変異体の同定(Identification of Clock Protein KaiC Mutants Losing Temperature Compensation Ability), Furuike Yoshihiko,Mukaiyama Atsushi,Yamashita Eiki,Kondo Takao,Akiyama Shuji, 生物物理, (一社)日本生物物理学会, Vol. 57, No. Suppl.1-2, p. S266-S266, 2017/08
Complex structure of cytochrome c-cytochrome c oxidase reveals a novel interprotein interaction mode, K. Shinzawa-Itoh,S. Shimada,J. Baba,S. Aoe,A. Shimada,E. Yamashita,J. Kang,M. Tateno,S. Yoshikawa,T. Tsukihara, EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, SPRINGER, Vol. 46, p. S174-S174, 2017/07
イネの細胞膜受容体OsCERK1の細胞内ドメインの結晶構造およびその活性化機構, 原田健一,山口公志,山下栄樹,新家粧子,藤原敏道,中川敦史,川崎努,児嶋長次郎,児嶋長次郎, 日本蛋白質科学会年会プログラム・要旨集, Vol. 17th, 2017/05/22
角度分割・時分割X線結晶構造解析による,哺乳類F1‐ATPaseのリン酸解離駆動の回転力発生機構の分析, 鈴木俊治,平田邦生,山下栄樹,遠藤斗志也,久堀徹,吉田賢右,野地博行, 日本蛋白質科学会年会プログラム・要旨集, Vol. 17th, 2017/05/22
Identification of Clock Protein KaiC Mutants Losing Temperature Compensation Ability, FURUIKE Yoshihiko,FURUIKE Yoshihiko,MUKAIYAMA Atsushi,MUKAIYAMA Atsushi,YAMASHITA Eiki,KONDO Takao,AKIYAMA Shuji,AKIYAMA Shuji, 生物物理(Web), Vol. 57, No. Supplement 1-2, 2017
Ragulatorの構造とRagとの複合体形成機構, 名田茂之,米原涼,中井昌弘,北村彩佳,小川輝,山下栄樹,中川敦史,岡田雅人, 日本生化学会大会(Web), Vol. 90th, 2017
高エネルギX線を利用した休止酸化型チトクロム酸化酵素の低損傷構造解析, 上野剛,島田敦広,山下栄樹,長谷川和也,熊坂崇,伊藤(新澤,恭子,吉川信也,月原冨武,月原冨武,山本雅貴, 日本結晶学会年会講演要旨集, Vol. 2016, 2016/11/17
ミトコンドリアの分子マシナリーと機能管理合成、構造、機能、適応、そして淘汰精密X線結晶構造解析によるチトクロム酸化酵素の酸素還元・プロトンポンプ機構(Management of mitochondrial functions by molecular machineries: biogenesis, structure, function, adaptation, and elimination Detailed crystal structural studies of bovine cytochrome oxidase to elucidate the coupling mechanism of dioxygen reduction and proton pump), Tsukihara Tomitake,Shimada Atsuhiro,Yano Naomine,Muramoto Kazumasa,Shinzawa-Itoh Kyoko,Yamashita Eiki,Yoshikawa Shinya, 生物物理, (一社)日本生物物理学会, Vol. 56, No. Suppl.1-2, p. S172-S172, 2016/10
チトクロムcとチトクロムc酸化酵素の複合体構造が示す新しいタンパク質間相互作用様式(Complex structure of cytochrome c and cytochrome c oxidase shows a novel inter-protein interaction mode), Shimada Satoru,Shinzawa-Itoh Kyoko,Baba Junpei,Aoe Shimpei,Shimada Atsuhiro,Yamashita Eiki,Kang Jiyoung,Tateno Masaru,Yoshikawa Shinya,Tsukihara Tomitake, 生物物理, (一社)日本生物物理学会, Vol. 56, No. Suppl.1-2, p. S189-S189, 2016/10
チトクロム酸化酵素の高分解能結晶構造から明らかとなった高効率プロトンポンプ機構(High-resolution crystal structure of cytochrome c oxidase reveals the mechanism of highly efficient proton pumping), Shimada Atsuhiro,Yano Naomine,Muramoto Kazumasa,Yamashita Eiki,Shinzawa-Itoh Kyoko,Tsukihara Tomitake,Yoshikawa Shinya, 生物物理, (一社)日本生物物理学会, Vol. 56, No. Suppl.1-2, p. S190-S190, 2016/10
蛍光分光法による時計タンパク質KaiCの動的構造変化の解析(Spectroscopic characterization of the conformational change of the cyanobacterial clock protein KaiC), Mukaiyama Atsushi,Abe Jun,Furuike Yoshihiko,Yamashita Eiki,Kondo Takao,Akiyama Shuji, 生物物理, (一社)日本生物物理学会, Vol. 56, No. Suppl.1-2, p. S221-S221, 2016/10
時計タンパク質KaiCのリン酸化状態と脱リン酸化状態における構造上の差異(Structural Differences between Phosphorylated and Dephosphorylated States of Clock Protein KaiC), Furuike Yoshihiko,Abe Jun,Yamashita Eiki,Kondo Takao,Akiyama Shuji, 生物物理, (一社)日本生物物理学会, Vol. 56, No. Suppl.1-2, p. S228-S228, 2016/10
STRUCTURE ACTIVITY RELATIONSHIP STUDY FOR P1-P1 ' SITE OF TRANSITION STATE MIMIC INHIBITORS FOR BACE1, K. Kobayashi,Y. Hattori,K. Teruya,A. Sanjoh,A. Nakagawa,E. Yamashita,K. Akaji, JOURNAL OF PEPTIDE SCIENCE, WILEY, Vol. 22, p. S42-S42, 2016/09
チトクロム酸化酵素F型中間体の1.6Å分解能X線結晶構造解析, 江藤勇樹,島田敦広,山下栄樹,伊藤(新澤)恭子,月原冨武,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 16th, 2016/05/19
イネの耐病性応答に関与するOsPBI1の結晶構造解析, 原田健一,山下栄樹,井上健人,山口公志,藤原敏道,中川敦史,川崎努,児嶋長次郎, 日本蛋白質科学会年会プログラム・要旨集, Vol. 16th, 2016/05/19
チトクロムcとチトクロム酸化酵素の複合体での結晶構造が示す新しい蛋白質間相互作用様式, 島田悟,青江新平,伊藤(新澤)恭子,馬場淳平,島田敦広,KANG Jiyoung,舘野賢,山下栄樹,吉川信也,月原冨武,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 16th, 2016/05/19
緑膿菌由来多剤排出ポンプの外膜因子,OprNとOprJの結晶構造解析, 米原涼,山下栄樹,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 16th, 2016/05/19
チトクロム酸化酵素の様々な反応中間体及び反応中間体類似物の構造から提唱されるプロトンボンプ機構, 島田敦広,馬場淳平,山下栄樹,村本和優,伊藤(新澤)恭子,月原冨武,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 16th, 2016/05/19
X線自由電子レーザーを用いた,ポンプ・プローブ法によるチトクロム酸化酵素の時分割結晶構造解析, 波多野啓太,島田敦広,宮本朱梨,馬場清喜,山下恵太郎,久保稔,吾郷日出夫,平田邦生,上野剛,村上博則,山本雅貴,熊坂崇,山下栄樹,小倉尚志,伊藤(新澤)恭子,月原冨武,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 16th, 2016/05/19
新興呼吸器症候群の治療薬開発を目指したプロテアーゼ阻害剤の設計, 服部恭尚,嶋本康広,照屋健太,三城明,中川敦史,山下栄樹,小林数也,赤路健一, 日本化学療法学会雑誌, Vol. 64, No. Supplement-A, 2016/05/09
Spectroscopic characterization of the conformational change of the cyanobacterial clock protein KaiC, MUKAIYAMA Atsushi,MUKAIYAMA Atsushi,ABE Jun,FURUIKE Yoshihiko,FURUIKE Yoshihiko,YAMASHITA Eiki,KONDO Takao,AKIYAMA Shuji,AKIYAMA Shuji, 生物物理(Web), Vol. 56, No. Supplement 1-2, 2016
High-resolution crystal structure of cytochrome c oxidase reveals the mechanism of highly efficient proton pumping, SHIMADA Atsuhiro,YANO Naomine,MURAMOTO Kazumasa,YAMASHITA Eiki,YAMASHITA Eiki,SHINZAWA-ITOH Kyoko,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理(Web), Vol. 56, No. Supplement 1-2, 2016
Detailed crystal structural studies of bovine cytochrome oxidase to elucidate the coupling mechanism of dioxygen reduction and proton pump, TSUKIHARA Tomitake,TSUKIHARA Tomitake,SHIMADA Atsuhiro,YANO Naomine,MURAMOTO Kazumasa,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,YOSHIKAWA Shinya, 生物物理(Web), Vol. 56, No. Supplement 1-2, 2016
X線自由電子レーザーを用いたチトクロム酸化酵素の時分割構造解析から明らかとなった,銅イオンへの配位子結合によって制御されるプロトンポンプ経路の閉鎖メカニズム, 島田敦広,波多野啓太,宮本朱梨,伊藤(新澤,恭子,久保稔,馬場清喜,熊坂崇,山本雅貴,吾郷日出夫,平田邦生,山下恵太郎,山下栄樹,上野剛,吉川信也,月原冨武,月原冨武, 日本生化学会大会(Web), Vol. 89th, 2016
緑膿菌由来異物排出トランスポーターMuxBのX線結晶構造解析, 比嘉悠貴,米原涼,中川敦史,山下栄樹, 日本結晶学会年会講演要旨集, Vol. 2015, 2015/10/17
チトクロム酸化酵素内のMgを含む水クラスターが酸素取り込み前に4等量のプロトンを蓄積することで,高効率プロトンポンプ反応を可能にする, 島田敦広,矢野直峰,武村秀平,村本和優,山下栄樹,伊藤(新澤)恭子,前田友子,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
第2のチトクロムc結合部位を持つチトクロムc‐チトクロム酸化酵素共結晶のX線結晶構造解析, 青江新平,島田悟,伊藤(新澤,恭子,島田敦広,馬場淳平,武村秀平,山下栄樹,吉川信也,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
チトクロム酸化酵素F型中間体の高分解能X線結晶構造解析, 江藤勇樹,島田敦広,前田友子,山下栄樹,村本和優,伊藤(新澤)恭子,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
チトクロムcとチトクロム酸化酵素共結晶の高分解能X線結晶構造に基づく相互作用解明, 島田悟,青江新平,伊藤(新澤)恭子,島田敦広,馬場淳平,武村秀平,山下栄樹,吉川信也,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
高分解能X線結晶構造解析によるチトクロム酸化酵素の酸素還元・プロトンポンプ機構の解明, 月原冨武,島田敦広,島田悟,武村秀平,馬場淳平,村本和優,山下栄樹,伊藤(新澤)恭子,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
チトクロム酸化酵素の真のアジ化物イオン結合型構造により明らかになった,酸素還元中心の構造変化とプロトンポンプ経路の関係性, 波多野啓太,島田敦広,引田理英,蓼原瞳,山本旭麻,山下栄樹,前田友子,伊藤(新澤)恭子,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
核外輸送に置けるExportin‐5の構造基盤, 山澤龍治,小林武,慈幸千真理,月原冨武,中川敦史,山下栄樹, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
中性領域(pH7.3)でのウシ心筋チトクロム酸化酵素の結晶化及び構造解明, 萩本楓,伊藤(新澤)恭子,島田敦広,島田悟,FANGJIA Luo,山下栄樹,吉川信也,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
シアン結合完全還元型チトクロム酸化酵素のX線結晶構造解析から明らかになった,活性中心を構成するheme a3の高い可動性, 馬場淳平,島田敦広,山下栄樹,村本和優,伊藤(新澤)恭子,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 15th, 2015/05/26
緑膿菌由来異物排出蛋白質のX線結晶構造解析, 住田一真,米原涼,中江太治,中川敦史,山下栄樹, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 28th, 2015/01/10
SPring‐8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状, 山下栄樹,東浦彰史,吉村政人,長谷川和也,熊坂崇,古川行人,大端通,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 28th, 2015/01/10
Circadian timing governed by cyanobacterial KaiC ATPase, MUKAIYAMA Atsushi,MUKAIYAMA Atsushi,ABE Jun,HIYAMA Takuya,SON Seyoung,MORI Toshifumi,MORI Toshifumi,SAITO Shinji,SAITO Shinji,OSAKO Masato,WOLANIN Julie,YAMASHITA Eiki,KONDO Takao,AKIYAMA Shuji,AKIYAMA Shuji, 生物物理(Web), Vol. 55, No. Supplement 1-2, 2015
基質ペプチド配列に基づくアザ‐デカリン型SARS3CLプロテアーゼ阻害剤の合成と阻害活性評価, 服部恭尚,嶋本康広,小林数也,照屋健太,三城明,中川敦史,山下栄樹,赤路健一, 日本農芸化学会中部支部例会講演要旨集(Web), Vol. 174th, 2015
アザ‐デカリン骨格を有する新規SARS‐3CLプロテアーゼ阻害剤の合成と評価, 嶋本康広,服部恭尚,小林数也,照屋健太,三城明,中川敦史,山下栄樹,赤路健一, メディシナルケミストリーシンポジウム講演要旨集, Vol. 32nd, 2014/11/07
ATPase活性調節の理解に向けた時計タンパク質KaiCの機能的・構造的解析, 阿部淳,檜山卓也,向山厚,山下栄樹,近藤孝男,秋山修志, 生体分子科学討論会講演要旨集, Vol. 41st, p. 48-49, 2014/06/06
時計タンパク質KaiCのATPase活性に焦点をあてた周期調節の解析, 阿部淳,檜山卓也,向山厚,山下栄樹,近藤考男,秋山修志, 日本蛋白質科学会年会プログラム・要旨集, Vol. 14th, 2014/05/26
電位依存性プロトンチャネル(VSOP)の静的状態の結晶構造から考察する膜電位センサーの動作原理, 竹下浩平,坂田宗平,山下栄樹,藤原祐一郎,岡村康司,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 14th, 2014/05/26
CO結合型ウシ心筋チトクロムc酸化酵素に対する高分解能X線結晶構造解析法を用いた金属酸化還元中心によるプロトンポンプ制御機構の解明, 馬場淳平,島田敦広,矢野直峰,山下栄樹,武村秀平,前田友子,村本和優,伊藤(新澤)恭子,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 14th, 2014/05/26
時計タンパク質KaiC ATPaseのメカニズム解明に向けた構造生物学的研究, 檜山卓也,阿部淳,向山厚,山下栄樹,近藤孝男,秋山修志, 日本蛋白質科学会年会プログラム・要旨集, Vol. 14th, 2014/05/26
電位依存性プロトンチャネル(VSOP)の静的状態の結晶構造から考察する膜電位センサーの動作原理, 竹下浩平,坂田宗平,山下栄樹,藤原祐一郎,岡村康司,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 14th, 2014/05/26
CN-結合酸化型およびCN-結合部分還元型チトクロムc酸化酵素の高分解能X線結晶構造解析, 川原貴子,長尾修平,島田敦広,矢野直峰,武村秀平,前田友子,村本和優,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 14th, 2014/05/26
高分解能X線結晶構造解析によって明らかになったチトクロムc酸化酵素のプロトンポンプ反応過程におけるMgを含む水クラスターの機能, 矢野直峰,武村秀平,前田友子,村本和優,山下栄樹,伊藤(新澤)恭子,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 14th, 2014/05/26
X線自由電子レーザーを利用した球殻構造体の単粒子解析への取り組み, 日比真仁,竹田一旗,富崎友理子,花園祐矢,高場圭章,東浦彰史,村上満里奈,岩崎憲治,山下栄樹,中川敦史,三木邦夫, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 27th, 2014/01/11
SPring‐8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状, 山下栄樹,東浦彰史,吉村政人,長谷川和也,熊坂崇,古川行人,大端通,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 27th, 2014/01/11
3P093 X-ray structural analysis of the cytochrome c and cytochrome c oxidase(02. Heme proteins,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014)), Shimada Satoru,Shinzawa-Itoh Kyoko,Aoe Shimpei,Shimada Atsuhiro,Baba Jumpei,Takemura Syuhei,Yamashita Eiki,Tsukihara Tomitake,Yoshikawa Shinya, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 54, No. 1, 2014
1P112 High-resolution crystal structural analysis reveals that the two azide ions bind to Cytochrome c oxidase in different manner(03. Membrane proteins,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014)), Shimada Atsuhiro,Hikita Masahide,Tadehara Hitomi,Yamamoto Akima,Yamashita Eiki,Shinzawa-Itoh Kyoko,Maeda Tomoko,Tsukihara Tomitake,Yoshikawa Shinya, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 54, No. 1, 2014
3P012 Preliminary study of voltage-gated proton channel in activated state for X-ray crystallography(01A. Protein: Structure,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014)), Kumano Wataru,Takeshita Kohei,Emura Kohta,Yamashita Eiki,Okamura Yasushi,Nakagawa Atsushi, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 54, No. 1, 2014
チトクロム酸化酵素のプロトンポンプ逆流防止機構の解析, 馬場淳平,長尾修平,川原貴子,矢野直峰,島田敦広,山下栄樹,村本和優,伊藤(新澤)恭子,月原冨武,吉川信也, 日本結晶学会年会講演要旨集, Vol. 2014, 2014
高分解能X線結晶構造解析によるチトクロム酸化酵素のMgを含む水クラスターの機能, 矢野直峰,武村修平,島田敦広,村本和優,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本結晶学会年会講演要旨集, Vol. 2014, 2014
バクテリオファージMuのネックサブユニットgp36の結晶構造, 岩崎拓真,山下栄樹,中川敦史,武田茂樹, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 37th, 2014
バクテリオファージMu尾繊維サブユニットとその特異的シャペロン複合体の精製,構造解析, 坂井康平,山下栄樹,中川敦史,武田茂樹, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 37th, 2014
電位依存性プロトンチャネルの結晶構造と膜電位センサーの作動機構, 竹下浩平,坂田宗平,山下栄樹,藤原祐一郎,岡村康司,中川敦史, 日本生化学会大会(Web), Vol. 87th, p. 1S06P-4 (WEB ONLY)-4], 2014
ヒドロキシメチルカルボニル型及びヒドロキシエチルアミン型BACE1阻害剤の合成と活性評価, 小林数也,秋山朋美,野原由江,後藤紗希,岡部真実,佐藤夏美,伊藤美紀,上野佳奈美,服部恭尚,照屋健太,三城明,中川敦史,山下栄樹,赤路健一, メディシナルケミストリーシンポジウム講演要旨集, Vol. 31st, 2013/11/01
SACLAによるウシ心筋チトクロム酸化酵素の無損傷高分解能結晶構造解析, 吾郷日出夫,平田邦生,上野剛,村上博則,山本雅貴,山下栄樹,伊藤(新澤)恭子,加藤公児,畑中美樹,武村修平,矢野直峰,吉川信也,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2013, 2013/10/12
X線自由電子レーザーを用いた球状生体超分子複合体の単粒子構造解析への取り組み, 東浦彰史,村上満理奈,岩崎憲治,山下栄樹,竹田一旗,花園祐矢,高場圭章,日比真仁,富崎友理子,三木邦夫,中川敦史, 日本結晶学会年会講演要旨集, Vol. 2013, 2013/10/12
リガンドフリー型Exportin‐5の構造解析, 山澤龍治,小林武,慈幸千真理,李守宰,中川敦史,柴田理志,岡正啓,片平じゅん,米田悦啓,月原冨武,山下栄樹, 日本結晶学会年会講演要旨集, Vol. 2013, 2013/10/12
Proton pumping mechanism of bovine heart cytochrome c oxidase, S. Yoshikawa,M. Kubo,S. Nakashima,T. Ogura,J. Kang,M. Tateno,N. Yano,K. Muramoto,K. Shinzawa-Itoh,E. Yamashita,T. Tsukihara, FEBS JOURNAL, WILEY-BLACKWELL, Vol. 280, p. 252-252, 2013/07
ウシ心筋チトクロム酸化酵素のMgを含む水クラスターの機能の高分解能X線結晶構造解析による研究, 矢野直峰,加藤公児,山下栄樹,村本和優,伊藤(新澤)恭子,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 13th, 2013/05/31
ウシ心筋チトクロム酸化酵素の酸性アミノ酸残基のイオン化状態のX線結晶学的解析, 武村秀平,加藤公児,矢野直峰,山下栄樹,村本和優,伊藤(新澤)恭子,月原富武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 13th, 2013/05/31
SPring‐8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)8L44XUの現状, 山下栄樹,東浦彰史,吉村政人,長谷川和也,熊坂崇,古川行人,大端通,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 26th, 2013/01/12
異物排出タンパク質のX線結晶構造解析, 板倉勇太,藤岡美貴,米原涼,池田悦子,原田健一,中江太治,山下栄樹,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 26th, 2013/01/12
3P287 Approaches to cohherent X-ray diffraction imaging of single virus particle using X-ray free-electron laser(27. Bioimaging,Poster), Higashiura Akifumi,Murakami Marina,Iwasaki Kenji,Yamashita Eiki,Takeda Kazuki,Hanazono Yuya,Takaba Kiyofumi,Hibi Masahito,Tomisaki Yuriko,Miki Kunio,Nakagawa Atsushi, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 53, No. 1, 2013
Structural analysis of bovine heart cytochrome c oxidase in the cyanide- and azide-bound fully oxidized states, MURAMOTO Kazumasa,MOCHIZUKI Masao,YANO Naomine,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 53, No. Supplement 1-2 (Web), 2013
Structural analysis of bovine heart cytochrome c oxidase in the CO- and cyanide-bound mixed valence states, MURAMOTO Kazumasa,MOCHIZUKI Masao,TANIGUCHI Maki,YANO Naomine,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 53, No. Supplement 1-2 (Web), 2013
精密結晶構造解析によるチトクロム酸化酵素の反応機構の研究, 矢野直峰,新澤(伊藤)恭子,畑中美紀,武村修平,藤澤秀徳,村本和優,加藤公児,山下栄樹,吉川信也,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2012, p. 19-s19, 2012/10/25
低分解能データを利用したディスオーダー領域の構造解析に向けた試み, 木平清人,姜志れい,前田将司,中川宗,三角裕子,菅倫寛,山下栄樹,舘野賢,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2012, 2012/10/25
ウシ心筋チトクロム酸化酵素休止酸化型の高分解能X線結晶構造解析, 矢野直峰,村本和優,伊藤(新澤)恭子,前田友子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 12th, 2012/05/31
氷晶防止剤の導入方法によるウシ心筋チトクロム酸化酵素結晶の分解能の向上, 畑中美紀,藤田和也,矢野直峰,前田友子,伊藤(新澤)恭子,村本和優,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 12th, 2012/05/31
ウシ心筋チトクロム酸化酵素反応中間体のX線結晶構造解析, 村本和優,木登梨佳,佐々木歩惟,藤澤秀徳,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 12th, 2012/05/31
Exportin‐5によるRNAsの核外輸送メカニズムの解明, 山澤龍治,山下栄樹,LEE Soo Jae,慈幸千真理,柴田理志,片平じゅん,中川敦史,米田悦啓,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 12th, 2012/05/31
SPring‐8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状, 山下栄樹,梅名泰史,東浦彰史,吉村政人,長谷川和也,熊坂崇,古川行人,大端通,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 25th, 2012/01/06
X-ray structural analysis of bovine heart cytochrome c oxidase to clarify redox coupled structural changes at H atom level, YANO Naomine,MURAMOTO Kazumasa,SHINZAWA-ITOH Kyoko,MAEDA Tomoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya,SHIRO Yoshitugu,SHIRO Yoshitugu, 生物物理, Vol. 52, No. Supplement 1, 2012
ウシ心筋チトクロム酸化酵素の高分解能X線構造解析と水クラスターの役割, 矢野直峰,村本和優,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也,城宜嗣, 日本生体エネルギー研究会討論会講演要旨集, Vol. 38th, p. 83-84, 2012
緑膿菌由来多剤排出トランスポーターMexBの構造生物学的研究, 米原涼,山下栄樹,原田健一,佐藤尚紀,松浦孝範,村上聡,中江太治,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 11th, 2011/05/27
ウシ心筋チトクロム酸化酵素休止酸化型の1.4Å分解能X線構造解析, 矢野直峰,村本和優,中川徹也,前田友子,新澤(伊藤)恭子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 11th, 2011/05/27
緑膿菌多剤排出ポンプサブユニットMexAの全体構造解析への試み, 原田健一,米原涼,松浦孝範,山下栄樹,鈴木守,中江太治,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 11th, 2011/05/27
Dnmt1によるメチル化模様維持機構に関する構造生物学的研究, 竹下浩平,末武勲,山下栄樹,菅倫寛,中川敦史,田嶋正二, 日本蛋白質科学会年会プログラム・要旨集, Vol. 11th, 2011/05/27
ウシ心筋チトクロム酸化酵素の還元・再酸化による構造変化, 村本和優,田村直樹,藤澤秀徳,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 11th, 2011/05/27
ウシ心筋チトクロム酸化酵素還元型の1.4Å分解能X線構造解析, 藤澤秀徳,村本和優,矢野直峰,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 11th, 2011/05/27
全立体構造決定から切り開く謎の巨大粒子ボルトの機能解明, 田中秀明,加藤公児,住澤知之,山下栄樹, 生化学, Vol. 83, No. 5, p. 392-395, 2011/05/25
Lipid Binding Sites in Membrane Proteins: Cytochrome BC Complexes, S. Saif Hasan,Eiki Yamashita,William A. Cramer, BIOPHYSICAL JOURNAL, CELL PRESS, Vol. 100, No. 3, p. 383-383, 2011/02
SPring‐8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状, 山下栄樹,鈴木守,吉村政人,長谷川和也,熊坂崇,古川行人,大端通,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 24th, 2011/01/07
緑膿菌におけるRND型トランスポーターMexBの高分解能X線結晶構造解析, 米原涼,山下栄樹,原田健一,佐藤尚紀,松浦孝範,鈴木守,村上聡,中江太治,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 24th, 2011/01/07
2SJ-05 X-ray structure of the vault, the largest cytoplasmic ribonucleo protein particle(2SJ New developments in protein complex research: From molecules to supramolecules and aggregates,The 49th Annual Meeting of the Biophysical Society of Japan), Tanaka Hideaki,Kato Koji,Yamashita Eiki,Sumizawa Tomoyuki,Zhou Yong,Yao Min,Iwasaki Kenji,Yoshimura Masato,Tsukihara Tomitake, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 51, 2011
Structural changes of bovine cytochrome c oxidase dependent on the redox states, Kazumasa Muramoto,Hidenori Fujisawa,Naomine Yano,Tomoko Maeda,Kyoko Shinzawa-Itoh,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 67, p. C265-C265, 2011
High resolution analysis and anomalous dispersion analysis of bovine cytochrome c oxidase, Naomine Yano,Kazumasa Muramoto,Michihiro Suga,Tomoko Maeda,Kyoko Shinzawa-Itoh,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 67, p. C265-C266, 2011
X-ray structural analysis of cytochrome c oxidase in the resting oxidized state at 1.4Å resolution, YANO Naomine,MURAMOTO Kazumasa,NAKAGAWA Tetsuya,SHINZAWA-ITOH Kyoko,MAEDA Tomoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 51, No. Supplement 1, 2011
Crystallization of bovine cytochrome c oxidase by detergents mixture, HATANAKA Miki,MAEDA Tomoko,MISAKI Tomonori,SUGIMURA Takashi,SHINZAWA-ITOH Kyoko,MURAMOTO Kazumasa,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 51, No. Supplement 1, 2011
X-ray structural analysis of P form intermediate of bovine cytochrome c oxidase, KITO Rika,MURAMOTO Kazumasa,MAEDA Tomoko,ITO-SHINZAWA Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 51, No. Supplement 1, 2011
X-ray structural analysis of F form intermediate of bovine cytochrome c oxidase, SASAKI Ai,MURAMOTO Kazumasa,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 51, No. Supplement 1, 2011
X-ray structural analysis of R and O form intermediates of bovine cytochrome c oxidase, FUJISAWA Hidenori,MURAMOTO Kazumasa,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 51, No. Supplement 1, 2011
Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1), TAKESHITA Kohei,SUETAKE Isao,YAMASHITA Eiki,SUGA Michihiro,NARITA Hirotaka,NAKAGAWA Atsushi,TAJIMA Shoji, 生物物理, Vol. 51, No. Supplement 1, 2011
Crystal structure analysis of multidrug transporter MexB, Ryo Yonehara,Eiki Yamashita,Kenichi Harada,Naoki Sato,Takanori Matsuura,Satoshi Murakami,Taiji Nakae,Atsushi Nakagawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 67, p. C744-C744, 2011
チトクロム酸化酵素反応サイクルの構造解析, 村本和優,木登梨佳,佐々木歩惟,藤澤秀徳,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本生体エネルギー研究会討論会講演要旨集, Vol. 37th, p. 42-43, 2011
チトクロム酸化酵素反応中間体(P型,F型,O型)の構造解析, 木登梨佳,村本和優,佐々木歩惟,藤澤秀徳,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本生体エネルギー研究会討論会講演要旨集, Vol. 37th, p. 102-103, 2011
チトクロム酸化酵素の高分解能X線結晶構造解析戦略, 藤澤秀徳,矢野直峰,村本和優,新澤(伊藤)恭子,山下栄樹,吉川信也,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2011, 2011
Muファージのテールスパイクタンパク質gp45のC末端のX線構造解析, 原田健一,山下栄樹,中川敦史,上野貴志,武田茂樹, 日本結晶学会年会講演要旨集, Vol. 2011, 2011
Photo-dependent binding structures of CO and NO on the heme-copper site in bovine cytochrome c oxidase, Kazumasa Muramoto,Kazuhiro Ohta,Kyoko Shinzawa-Itoh,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1797, p. 97-98, 2010/07
The O-2 reduction and proton pumping gate mechanisms of bovine heart cytochrome c oxidase, Kazumasa Muramoto,Kazuhiro Ohta,Kyoko Shinzawa-Itoh,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1797, p. 102-103, 2010/07
緑膿菌の多剤排出ポンプ,MexA‐OprM複合体のX線結晶構造解析への試み, 米原涼,山下栄樹,原田健一,佐藤尚紀,松浦孝範,鈴木守,村上聡,中江太治,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
巨大な超分子複合体を見る, 加藤公児,田中秀明,山下栄樹,住澤知之,周勇, 姚閔,岩崎憲治,吉村政人,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
microRNA核外輸送複合体のX線結晶構造解析, 慈幸千真理,山下栄樹,李守宰,柴田理志,片平じゅん,中川敦史,米田悦啓,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
還元型ウシ心筋チトクロム酸化酵素の高分解能X線構造解析, 藤澤秀徳,村本和優,伊藤(新沢)恭子,前田友子,山下栄樹,吉川信也,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
microRNA核外輸送複合体のX線結晶構造解析, 慈幸千真理,山下栄樹,李守宰,柴田理志,片平じゅん,中川敦史,米田悦啓,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
ギャップジャンクションヘミチャンネル間の相互作用に関する構造研究, 中川宗,前田将司,菅倫寛,山下栄樹,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
ユビキチンE3リガーゼCblファミリーの標的分子認識の特異性, 竹下浩平,手塚徹,山下栄樹,鈴木守,山本正,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
膜電位感受性ホスファターゼVSPの細胞質領域のX線結晶構造解析, 松田真,坂田宗平,竹下浩平,鈴木守,山下栄樹,岡村康司,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
チトクロム酸化酵素の水素位置決定を目的としたX線結晶構造解析, 菅倫寛,矢野直峰,村本和優,山下栄樹,望月正雄,前田和範,伊藤(新澤)恭子,吉川信也,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
ウシチトクロム酸化酵素のヘム・銅部位におけるNO,COの光化学的結合解離構造, 村本和優,太田和宏,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
ウシ心筋チトクロム酸化酵素の酵素還元反応とプロトンポンプゲート機構, 村本和優,太田和宏,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本蛋白質科学会年会プログラム・要旨集, Vol. 10th, 2010/05/15
X-ray structural analysis of catclytic F intermediates in bovine cytochrome c oxidase, SASAKI Ai,MURAMOTO Kazumasa,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 50, No. Supplement 2, 2010
High resolution X-ray structural analysis of cytochrome c oxidase to clarify the proton pumping mechanism at hydrogen atom level., YANO Naomine,MURAMOTO Kazumasa,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,MOCHIZUKI Masao,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 50, No. Supplement 2, 2010
An X-ray structural evaluation of the possibility of chloride binding to the O2 reduction site of bovine heart cytochrome c oxidase, TSUKIHARA Tomitake,TSUKIHARA Tomitake,SUGA Michihiro,MURAMOTO Kazumasa,SHINZAWA-ITOH Kyoko,MAEDA Tomoko,YAMASHITA Eiki,YOSHIKAWA Shinya, 生物物理, Vol. 50, No. Supplement 2, 2010
Reaction mechanism of cytochrome c oxidase based on the O2 analogues-bound structures., MURAMOTO Kazumasa,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 50, No. Supplement 2, 2010
Redox dependent structural change of cytochrome c oxidase at 1.4Å resolution, FUJISAWA Hidenori,MURAMOTO Kazumasa,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,MAEDA Kazunori,MOCHIZUKI Masao,SUGA Michihiro,OHTA Kazuhiro,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 50, No. Supplement 2, 2010
X-ray structural analysis of catalytic O intermediate in bovine cytochrome c oxidase, YOSHIKAWA Shinya,MURAMOTO Kazumasa,NAKABAYASHI Ryota,MAEDA Tomoko,ITO-SHINZAWA Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake, 生物物理, Vol. 50, No. Supplement 2, 2010
X-ray structural analysis of catalytic peroxy intermediate in bovine cytochrome c oxidase, KITO Rika,MURAMOTO Kazumasa,MAEDA Tomoko,ITO-SHINZAWA Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 50, No. Supplement 2, 2010
Photo-dependent binding structures of CO and NO on the heme-copper site in bovine cytochrome c oxidase., MURAMOTO Kazumasa,OHTA Kazuhiro,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 50, No. Supplement 2, 2010
Exciton Interactions Between Hemes b(n) and b(p) in the Cytochrome b(6)f Complex, S. Saif Hasan,Stanislav D. Zakharov,Eiki Yamashita,H. Bohme,William A. Cramer, BIOPHYSICAL JOURNAL, CELL PRESS, Vol. 98, No. 3, p. 564A-564A, 2010/01
pre‐microRNA核外輸送複合体のX線結晶構造解析, 山下栄樹,慈幸千真理,LEE Soo Jae,柴田理志,片平じゅん,中川敦史,米田悦啓,月原冨武, 生化学, 2010
緑膿菌由来多剤排出トランスポーター,MexBの高分解能X線結晶構造解析, 米原涼,山下栄樹,原田健一,佐藤尚紀,松浦孝範,鈴木守,村上聡,中江太治,中川敦史, 日本結晶学会年会講演要旨集, Vol. 2010, 2010
緑膿菌由来の多剤排出トランスポーターMexAの全体構造解析への試み, 原田健一,米原涼,松浦孝範,山下栄樹,鈴木守,中江太治,中川敦史, 日本結晶学会年会講演要旨集, Vol. 2010, 2010
ウシ心筋チトクロム酸化酵素の高分解能X線構造解析, 矢野直峰,村本和優,藤澤秀徳,前田友子,伊藤(新澤)恭子,望月正雄,山下栄樹,月原冨武,吉川信也, 日本生体エネルギー研究会討論会講演要旨集, Vol. 36th, p. 136-137, 2010
SPring‐8阪大蛋白研ビームラインBL44XUの現状, 山下栄樹,鈴木守,吉村政人,長谷川和也,熊坂崇,古川行人,大端通,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本結晶学会年会講演要旨集, Vol. 2010, 2010
チトクロム酸化酵素のO2還元反応機構, 村本和優,太田和宏,木登梨佳,佐々木歩惟,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本生体エネルギー研究会討論会講演要旨集, Vol. 36th, p. 140-141, 2010
A Description of a Structure Determination Procedure of a Gap Junction Channel at 3.5A Resolution., 菅倫寛,前田将司,中川宗,山下栄樹, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 51, No. 6, p. 327-333, 2009/12/30
高精度の異常分散効果の測定より明らかになった事実:酸化型チトクロム酸化酵素の還元中心Fe‐Cu間にはCl-イオンは存在しない, 菅倫寛,村本和優,山下栄樹,望月正雄,前田和範,伊藤(新澤)恭子,吉川信也,月原冨武, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 23rd, 2009/12/10
SPring‐8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状, 山下栄樹,吉村政人,鈴木守,長谷川和也,古川行人,大畑通,熊坂崇,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 23rd, 2009/12/10
超巨大タンパク質‐核酸複合体vaultの構造解析, 山下栄樹,加藤公児,田中秀明, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 23rd, 2009/12/10
X-ray structure analysis of a 10MDa biological macromolecule, 山下栄樹,加藤公児,田中秀明, 放射光, Vol. 22, No. 6, p. 284-291, 2009/11/30
鉄硫黄クラスター生合成機構の構造基盤, 矢部俊樹,海野昌喜,菊池晶裕,山下栄樹,松井敏高,中井正人,齋藤正男, 酸化反応討論会講演要旨集, Vol. 42nd, p. 129-131, 2009/11/14
ターゲットタンパク研究プログラムの紹介 2.解析部門高難度蛋白質をターゲットとした放射光X線結晶構造解析技術の開発微小結晶からのデータ収集のためのデータ処理技術の開発, 中川敦史,山下栄樹,吉村政人,鈴木守, 蛋白質核酸酵素, Vol. 54, No. 12, p. 1496-1498, 2009/09/10
X-ray Crystal Structure of the Vault, Largest Ribonucleoprotein Particle, with a Molecular Weight of 10 MDa, 田中秀明,加藤公児,山下栄樹, 日本結晶学会誌, Vol. 51, No. 3, p. 189-194, 2009/06/30
ユビキチンE3リガーゼCblファミリーの標的分子認識の特異性, 竹下浩平,手塚徹,野村さつき,山下栄樹,鈴木守,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 9th, 2009/04/24
3.5Å分解能でのギャップジャンクションチャネルの構造決定手順, 菅倫寛,前田将司,中川宗,山下栄樹,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 9th, 2009/04/24
緑膿菌多剤排出トランスポーターサブユニットMexAのdisordered domainの結晶構造解析への試み, 原田健一,松浦孝範,山下栄樹,鈴木守,中江太治,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 9th, 2009/04/24
ギャップ結合チャネルのX線結晶構造, 前田将司,中川宗,菅倫寛,山下栄樹,大嶋篤典,藤吉好則,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 9th, 2009/04/24
巨大複合体結晶の放射光X線データ測定と処理―巨大超分子の構造に原子レベルで迫る, 山下栄樹,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 9th, 2009/04/24
1YP1-09 Crystal structure of human connexin 26 gap junction channel(1YP1 Early Research in Biophysics Award Candidate Presentations,The 47th Annual Meeting of the Biophysical Society of Japan), Maeda Shoji,Nakagawa So,Suga Michihiro,Yamashita Eiki,Oshima Atsunori,Fujiyoshi Yoshinori,Tsukihara Tomitake, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 49, 2009
1P-010 Structural insight into docking compatibility of heterotyic gap junction channel(Protein:Structure, The 47th Annual Meeting of the Biophysical Society of Japan), Nakagawa So,Maeda Shoji,Suga Michihiro,Yamashita Eiki,Tsukihara Tomitake, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 49, 2009
X-ray structural analysis of cytochrome c oxidase in the resting oxidized state at 1.4Å resolution, MAEDA Kazunori,MURAMOTO Kazumasa,MOCHIZUKI Masao,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,SUGA Michihiro,OHTA Kazuhiro,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 49, No. Supplement 1, 2009
Cytochrome c oxidase crystal in the F intermediate state produced by reoxidation, MURAMOTO Kazumasa,HARADA Rie,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 49, No. Supplement 1, 2009
Refined structural analysis of azide ion bound cytochrome c oxidase in the oxidized state, MURAMOTO Kazumasa,INAOKA Rika,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 49, No. Supplement 1, 2009
Cytochrome c Oxidase Structures Facilitating the Four-Electron Reduction of Oxygen in One-Step and the High Proton Pump Efficiency, OHTA Kazuhiro,MURAMOTO Kazumasa,SHINZAWA-ITOH Kyoko,MOCHIZUKI Masao,KANDA Katsumasa,TANIGUCHI Maki,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 49, No. Supplement 1, 2009
SPring‐8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状, 山下栄樹,鈴木守,吉村政人,長谷川和也,熊坂崇,古川行人,大端通,上野剛,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 22nd, 2009
チトクロム酸化酵素のO2還元反応機構, 村本和優,太田和宏,前田友子,伊藤(新澤)恭子,山下栄樹,月原冨武,吉川信也, 日本生体エネルギー研究会討論会講演要旨集, Vol. 35th, p. 25-26, 2009
分子量約1000万の核酸‐タンパク質複合体vaultのX線結晶構造解析, 田中秀明,加藤公児,山下栄樹,住澤知之,周勇, 姚閔,岩崎憲治,吉村政人,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2009, 2009
高精度の異常分散効果の測定により明らかになった事実:酸化型チトクロム酸化酵素の還元中心Fe‐Cu間にCl-イオンは存在しない, 菅倫寛,村本和優,山下栄樹,望月正雄,前田和範,伊藤(新澤)恭子,吉川信也,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2009, 2009
低・中分解能データから引き出される超分子の振るまい―高難度タンパク質複合体の構造解析を目指して―, 山下栄樹, 日本結晶学会年会講演要旨集, Vol. 2009, 2009
X-ray structure of the vault purified from rat liver, TANAKA Hideaki,KATO Koji,SUMIZAWA Tomoyuki,YAMASHITA Eiki,YOSHIMURA Masato,YONG Zhou,YAO Min,IWASAKI Kenji,TSUKIHARA Tomitake, 生物物理, Vol. 48, No. Supplement 1, 2008/12
Structure-Function of the Cytochrome b(6)f Complex, D. Baniulis,E. Yamashita,H. Zhang,S. S. Hasan,W. A. Cramer, PHOTOCHEMISTRY AND PHOTOBIOLOGY, WILEY-BLACKWELL PUBLISHING, INC, Vol. 84, No. 6, p. 1349-1358, 2008/11
Structural analyses for lipid/protein interactions in bovine heart cytochrome c oxidase, Yoko Shinzawa-Itoh,Hiroshi Aoyama,Kazumasa Muramoto,Hirohito Terada,Tsuyoshi Kurauchi,Yoshiki Tadehara,Akiko Yamasaki,Takashi Sugimura,Sadamu Kurono,Kazuo Tsujimoto,Tsunehiro Mizushimae,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1777, p. S71-S71, 2008/07
X-ray crystal structural analysis of cyanide binding cytochrome c oxidase, Masao Mochizuki,Isao Tomita,Kazumasa Muramoto,Iyoko Shinzawa-Itoh,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1777, p. S69-S69, 2008/07
X-ray structure of carbon monoxide at copper site of the dinuclear site of cytochrome c oxidase, Kazumasa Muramoto,Naoki Nakagawa,Maki Taniguchi,Katsumasa Kandy,Yoko Shinzawa-Itoh,Tomoko Maeda,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1777, p. S71-S71, 2008/07
High resolution X-ray diffraction experiment of bovine cytochrome c oxidase, Michihiro Suga,Kyoko Ito-Shinzawa,Hiroshi Aoyama,Kazumasa Muramoto,Eiki Yamashita,Shinya Yoshikawa,Tomitake Tsukihara, BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, ELSEVIER SCIENCE BV, Vol. 1777, p. S68-S68, 2008/07
2P-057 A target recognition mechanism of human Cb1 family ubiquitin E3 ligase(The 46th Annual Meeting of the Biophysical Society of Japan), Takeshita Kohei,Tezuka Tohru,Nomura Satsuki,Yamashita Eiki,Suzuki Mamoru,Yamamoto Tadashi,Nakagawa Atsushi, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 48, p. S83-S84, 2008
1S6-3 Crystal structural analysis using diffraction intensity data collected from many isomorphous protein crystals(1S6 Cutting edge of protein crystallography with synchrotron radiation,The 46th Annual Meeting of the Biophysical Society of Japan), Yamashita Eiki, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 48, 2008
1P-002 X-ray structure of the vault purified from rat liver(Invited Talk for Early Research in Biophysics Award,Early Research in Biophysics Award)(The 46th Annual Meeting of the Biophysical Society of Japan), Tanaka Hideaki,Kato Koji,Sumizawa Tomoyuki,Yamashita Eiki,Yoshimura Masato,Yong Zhou,Yao Min,Iwasaki Kenji,Tsukihara Tomitake, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 48, 2008
1P-022 Crystal structure of human gap junction channel(The 46th Annual Meeting of the Biophysical Society of Japan), Maeda Shoji,Suga Michihiro,Nakagawa So,Yamashita Eiki,Oshima Atsunori,Fujiyoshi Yoshinori,Tsukihara Tomitake, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 48, 2008
X-ray crystal structural analysis of cyanide binding cytochrome c oxidase, Masao Mochizuki,Isao Tomita,Kazumasa Muramoto,Kyoko Shinzawa-Itoh,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 64, p. C287-C288, 2008
X-ray structural analysis of Zinc/Cadmium inhibitory site in bovine heart cytochrome c oxidase, Kazumasa Muramoto,Kazunori Maeda,Takeshi Takahashi,Kunio Hirata,Kyoko Shinzawa-Itoh,Tomoko Maeda,Shinji Yoko-o,Eiki Yamashita,Hiroshi Aoyama,Tomitake Tsukihara,Shinya Yoshikawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 64, p. C288-C289, 2008
Structural analysis for lipid/protein interactions in bovine heart cytochrome c oxidase, Kyoko Shinzawa-Itoh,Hiroshi Aoyama,Kazumasa Muramoto,Hirohito Terada,Tsuyosyhi Kurauchi,Yoshiki Tadehara,Akiko Yamasaki,Takashi Sugimura,Sadamu Kurono,Kazuo Tsujimoto,Tsunehiro Mizushima,Eiki Yamashita,Tomitake Tsukihara,Shinya Yoshikawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 64, p. C289-C289, 2008
High resolution diffraction experiment of bovine cytochrome c oxidase, Michihiro Suga,Kyoko Ito-Sinzawa,Hiroshi Aoyama,Kazumasa Muramoto,Eiki Yamashita,Shinya Yoshikawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 64, p. C370-C370, 2008
X-ray structure of carbon monoxide at copper site of the dinuclear site of cytochrome c oxidase, Shinya Yoshikawa,Kazumasa Muramoto,Naoki Nakagawa,Maki Taniguchi,Katsumasa Kanda,Kyoko Shinzawa-Itoh,Tomoko Maeda,Eiki Yamashita,Tomitake Tsukihara, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 64, p. C288-C288, 2008
Refined structural analysis of carbon monoxide and nitric oxide at the dinuclear site of cytochrome c oxidase, MURAMOTO Kazumasa,NAKAGAWA Naoki,OHTA Kazuhiro,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 48, No. Supplement 1, 2008
X-ray structural analysis of zinc/cadmium inhibitory site in bovine heart cytochrome c oxidase, MAEDA Kazunori,MURAMOTO Kazumasa,TAKAHASHI Takeshi,MAEDA Tomoko,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 48, No. Supplement 1, 2008
High resolution and precise X-ray crystal structure determination of Cyctochrome c Oxidase, SUGA Michihiro,ITO-SHINZAWA Kyoko,AOYAMA Hiroshi,MURAMOTO Kazumasa,YAMASHITA Eiki,YOSHIKAWA Shinya,TSUKIHARA Tomitake, 生物物理, Vol. 48, No. Supplement 1, 2008
IPR beamline for macromolecular assemblies at SPring-8, Eiki Yamashita,Masato Yoshimura,Mamoru Suzuki,Takashi Kumasaka,Masaki Yamamoto,Shinya Yoshikawa,Tomitake Tsukihara,Atsushi Nakagawa, ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, INT UNION CRYSTALLOGRAPHY, Vol. 64, p. C340-C340, 2008
SPring‐8生体超分子複合体結晶構造解析ビームライン(BL44XU), 吉村政人,山下栄樹,鈴木守,山本雅貴,吉川信也,月原冨武,中川敦史, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 21st, 2007/12/20
SPring‐8生体超分子複合体構造解析ビームライン(BL44XU)の現状, 山下栄樹,吉村政人,鈴木守,熊坂崇,山本雅貴,吉川信也,中川敦史,月原冨武, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 21st, 2007/12/20
シトクロムP450camの結晶構造解析, 櫻井啓介,島田秀夫,山下栄樹,月原冨武, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 21st, 2007/12/20
酸化型ウシ心筋チトクロム酸化酵素のX線構造(X-ray structure of fully oxidized state of bovine heart cytochrome c oxidase), 青山浩,村本和優,平田邦夫,菅倫寛,伊藤恭子[新澤],山下栄樹,吉川信也,月原冨武, 生物物理, (一社)日本生物物理学会, Vol. 47, No. Suppl.1, p. S227-S227, 2007/11
超好熱古細菌Pyrococcus furiosus由来ウイルス様粒子の自己組織化及び耐熱機構について, 秋田総理,CHONG Tee Khoon,小笠原京子,田中秀明,山下栄樹,宮崎直幸,難波一徳,中石雄一郎,小野泰子,鈴木守,月原冨武,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 7th, 2007/05/07
Structure of the cytochrome b(6)f complex: Quinone analogue inhibitors as ligands of heme, W. Cramer,E. Yamashita,H. Zhang,D. Baniulis, PHOTOSYNTHESIS RESEARCH, SPRINGER, Vol. 91, No. 2-3, p. 188-188, 2007/02
3P098 X-ray structure of fully oxidized state of bovine heart cytochrome c oxidase(Hemeproteins,Poster Presentations), Aoyama H.,Muramoto K.,Hirata K.,Suga M.,Shinzawa-Itoh K.,Yamashita E.,Yoshikawa S.,Tsukihara T., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 47, 2007
X-ray structural analysis of catalytic intermediates in bovine heart cytochrome c oxidase, NABEKURA Hiroyuki,MURAMOTO Kazumasa,MOCHIZUKI Masao,SHINZAWA-ITOH Kyoko,MAEDA Tomoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 47, No. Supplement 1, 2007
X-ray crystal structural analysis of cyanide binding cytochrome c oxidase, MOCHIZUKI Masao,TOMITA Isao,MURAMOTO Kazumasa,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 47, No. Supplement 1, 2007
X-ray structural analysis of Zn inhibitory site in bovine heart cytochrome c oxidase, MURAMOTO Kazumasa,MAEDA Kazunori,SHINZAWA-ITOH Kyoko,MAEDA Tomoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 47, No. Supplement 1, 2007
X-ray structural analysis of the bovine heart cytochrome c oxidase in the mixed valence state, TANIGUCHI Maki,MURAMOTO Kazumasa,SHINZAWA-ITOH Kyoko,YAMASHITA Eiki,TSUKIHARA Tomitake,YOSHIKAWA Shinya, 生物物理, Vol. 47, No. Supplement 1, 2007
Entry of nuclease E colicins through the BtuB-OmpF translocon, Onkar Sharma,E. Yamashita,M. V. Zhalnina,S. D. Zakharov,W. A. Cramer, BIOPHYSICAL JOURNAL, BIOPHYSICAL SOCIETY, p. 435A-435A, 2007/01
Structure of the cytochrome b6f complex: Mechanism of inhibition by the quinone analogue, NQNO, Eiki Yamashita,Huamin Zhang,Xiaowei Shi,William A. Cramer, BIOPHYSICAL JOURNAL, BIOPHYSICAL SOCIETY, p. 74A-74A, 2007/01
ウシ心筋チトクロム酸化酵素の酸素透過経路のX線構造解析, 村本和優,伊藤(新澤)恭子,倉内毅,青山浩,山下栄樹,月原冨武,吉川信也, 日本生体エネルギー研究会討論会講演要旨集, Vol. 33rd, p. 53-54, 2007
ラット肝臓由来vaultのX線結晶構造解析, 田中秀明,加藤公児,住澤知之,吉村政人,山下栄樹,岩崎憲治,月原冨武, 日本結晶学会年会講演要旨集, Vol. 2007, 2007
葉緑体における鉄硫黄クラスター生合成機構の構造生物学, 矢部俊樹,山下栄樹,菊池晶裕,齋藤正男,中井正人, 生体分子科学討論会講演要旨集, Vol. 34th, p. 82-83, 2007
ラット肝臓由来RNA‐蛋白質複合体(ボルト)のX線結晶構造解析, 加藤公児,田中秀明,山下栄樹,藤田千鶴子,住澤友之,月原冨武, 日本蛋白質科学会年会プログラム・要旨集, Vol. 6th, 2006/03/31
超好熱古細菌Pyrococcus furiosus由来ウィルス様粒子の構造解析から予測されるウィルスの進化について, 秋田総理,TEE Khoon Chong,田中秀明,宮崎直幸,難波一徳,中石雄一郎,小野泰子,山下栄樹,鈴木守,月原冨武,中川敦史, 日本蛋白質科学会年会プログラム・要旨集, Vol. 6th, 2006/03/31
2P041 X-ray crystal structural analysis of vault from rat liver(29. Protein structure and dynamics (II),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006), TANAKA Hideaki,KATO Koji,Yamashita Eiki,FUJITA Chizuko,SUMIZAWA Tomoyuki,TSUKIHARA Tomitake, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 46, No. 2, 2006
超好熱細菌Pyrococcus furiosus由来ウィルス様粒子のX線結晶構造解析, 秋田総理,田中秀明,宮崎直幸,難波一徳,小野泰子,山下栄樹,鈴木守,月原冨武,中川敦史, 日本農芸化学会大会講演要旨集, Vol. 2005, 2005/03/05
3P111 Analysis of the CO-bound structure of cytochrome c oxidase, Kanda K.,Muramoto K.,Shinzawa-Itoh K.,Yamashita E.,Aoyama H.,Tukihara T.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 45, 2005
3P112 Analysis of the cyanide-bound structure of cytochrome c oxidase in the reduced state, Ohta K.,Muramoto K.,Shinzawa-Itoh K.,Yamashita E.,Aoyama H.,Tsukihara T.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 45, 2005
3P110 Strategies for collecting high resolution data of bovine heart cytochrome c oxidase, Aoyama H.,Yamashita E.,Shinzawa-Itoh K.,Yoshikawa S.,Tsukihara T., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 45, 2005
3P113 Structural analysis of the x-ray induced photoreduction of cytochrome c oxidase, Ido W.,Muramoto K.,Shinzawa-Itoh K.,Yamashita E.,Aoyama H.,Tsukihara T.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 45, 2005
3P016 Improvement of resolution of cytochrome c oxidase crystal using annealing method, Suga M.,Ito-Shinzawa K.,Aoyama H.,Yamashita E.,Yoshikawa S.,Tsukihara T., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 45, 2005
1P028 Crystal Structure of Human T-protein of Glycine Cleavage System, Okamura-Ikeda K.,Hosaka H.,Yoshimura M.,Yamashita E.,Toma S.,Nakagawa A.,Fujiwara K.,Motokawa Y.,Taniguchi H., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 45, 2005
酸化型ウシ心筋チトクロム酸化酵素の活性中心の構造, 青山浩,村本和優,菅倫寛,平田邦夫,山下栄樹,伊藤恭子[新沢],吉川信也,月原冨武, 生物物理, (一社)日本生物物理学会, Vol. 44, No. Suppl.1, p. S132-S132, 2004/11
2P093 Structural refinement of the NO- and CO-coordination in cytochrome c oxidase in the reduced state, Muramoto K.,Aoyama H.,Ishida K.,Kurauchi T.,Aonami S.,Yamashita E.,ShinzawaItoh K.,Tsukihara T.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 44, 2004
3SB06 High resolution structure of cytochrome c oxidase, Muramoto K.,Aoyama H.,Yamashita E.,Shinzawa-Itoh K.,Tsukihara T.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 44, 2004
Crystal structure of Tryptophan Synthase a subunit from Escherichiacoli, K.Nishio,Y.Morimoto,M.Ishiduka,E.Yamashita,K.Ogasawara,K.Yutani,T.Tsukihara, SPring-8 User Experiment Report, Vol. 12, p. 293-0, 2004
Importin‐betaとSREBP‐2の複合体の結晶構造解析, LEE S J,関本敏博,山下栄樹,名越絵美,中川敦,今本尚子,酒井宏明,吉村政人,米田悦啓, 日本分子生物学会年会プログラム・講演要旨集, Vol. 26th, 2003/11/25
大腸菌多剤排出膜輸送体のX線結晶構造解析, 村上聡,中島良介,山下栄樹,山口明人, 日本分子生物学会年会プログラム・講演要旨集, Vol. 26th, 2003/11/25
Crystal Structure of Bacterial Multi-Drug Efflux Transporter AcrB, 村上聡,中島良介,山下栄樹,山口明人, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 45, No. 4, p. 256-261, 2003/08/29
ウシ心筋チトクロム酸化酵素の酸素還元中心のシアン化物結合構造, 村本和優,原正生,青波里実,平田邦生,青山浩,山下栄樹,倉内毅,横尾信次,伊藤恭子[新沢],月原冨武,吉川信也, 生物物理, (一社)日本生物物理学会, Vol. 43, No. Suppl.1, p. S82-S82, 2003/08
ウシ心筋チトクロム酸化酵素Na+/Ca2+結合部位の構造, 村本和優,前河早希,青波里実,平田邦生,青山浩,山下栄樹,横尾信次,倉内毅,伊藤恭子[新沢],月原冨武,吉川信也, 生物物理, (一社)日本生物物理学会, Vol. 43, No. Suppl.1, p. S82-S82, 2003/08
ウシ心筋チトクロム酸化酵素の酸素還元中心付近における酸素透過経路, 村本和優,山下栄樹,青山浩,伊藤恭子[新沢],望月正雄,櫻井啓介,月原冨武,吉川信也, 生物物理, (一社)日本生物物理学会, Vol. 43, No. Suppl.1, p. S82-S82, 2003/08
X線照射による酸化型チトクロム酸化酵素活性中心の構造変化, 青山浩,西原正晴,村本和優,山下栄樹,伊藤恭子[新沢],吉川信也,月原冨武, 生物物理, (一社)日本生物物理学会, Vol. 43, No. Suppl.1, p. S83-S83, 2003/08
Crystal Structure of Bacterial Multi-drug Efflux Transporter AcrB, 村上聡,中島良介,山下栄樹,山口明人, 放射光, Vol. 16, No. 4, p. 204-212, 2003/07/31
Crystal structure of bacterial multidrug efflux transporter AcrB, A Yamaguchi,S Murakami,R Nakshima,E Yamashita, FASEB JOURNAL, FEDERATION AMER SOC EXP BIOL, Vol. 17, No. 5, p. A1185-A1185, 2003/03
Crystal structure of raat monoamine oxidase A, a transmembrane protein, Ma J.,Yoshimura M.,Kubota F.,Yamashita E.,Nakagawa A.,Ito A.,Tsukihara T., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 43, 2003
大腸菌異物排出トランスポーターAcrBの結晶構造, 村上聡,中島良介,山下栄樹,山口明人, 生体膜と薬物の相互作用シンポジウム講演要旨集, Vol. 24th, p. 63-66, 2002/11/07
ウシ心筋チトクロム酸化酵素の酸化還元に伴うHis503のプロトン取り込み機構, 村本和優,青波里実,平田邦生,青山浩,伊藤(新沢,恭子,山下栄樹,月原冨武,横尾信次,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 40th, No. Suppl.2, p. S127-S127, 2002/11
大腸菌多剤排出トランスポーターAcrBの結晶構造, 村上聡,中島良介,山下栄樹,山口明人, 日本生物物理学会年会講演予稿集, The Biophysical Society of Japan General Incorporated Association, Vol. 40th, No. 2, 2002/11
呼吸阻害剤(ヘム配位子)結合還元型ウシ心筋チトクロム酸化酵素のX線結晶構造解析, 村本和優,石田訓康,倉内毅,青山浩,山下栄樹,平田邦生,月原冨武,伊藤(新沢)恭子,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 40th, No. Suppl.2, p. S126-S126, 2002/11
完全酸化型ウシ心筋チトクロム酸化酵素のX線回折強度データ収集, 青山浩,平田邦生,村本和優,山下栄樹,小倉尚志,伊藤(新沢)恭子,吉川信也,月原冨武, 日本生物物理学会年会講演予稿集, The Biophysical Society of Japan General Incorporated Association, Vol. 40th, No. 2, 2002/11
ウシ心筋チトクロム酸化酵素サブユニットIIIの役割酸素透過経路へのDCCD結合構造, 村本和優,青波里実,倉内毅,青山浩,山下栄樹,平田邦生,月原冨武,伊藤(新沢)恭子,吉川信也, 日本生物物理学会年会講演予稿集, The Biophysical Society of Japan General Incorporated Association, Vol. 40th, No. 2, 2002/11
超好熱菌由来のウイルス様粒子の構造解析, CHONG K T,中石雄一郎,万代有美,小野泰子,田中秀明,山下栄樹,中川敦史,月原冨武, 情報計算化学生物学会大会論文集, Vol. 3rd, p. 326-327, 2002/09/18
異物排出膜輸送体AcrBのX線結晶構造, 村上聡,中島良介,山下栄樹,山口明人, 生化学, Vol. 74, No. 8, 2002/08/25
ウシ心筋チトクロム酸化酵素の反応機構, 吉川信也,村本和優,伊藤恭子,望月正雄,青山浩,山下栄樹,月原冨武, 生化学, Vol. 74, No. 8, p. 663-663, 2002/08/25
ウシ心筋チトクロム酸化酵素の高分解能構造解析の現状, 青山浩,平田邦夫,山下栄樹,月原富武,岡田英理,村本和優,伊藤(新沢)恭子,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 39th, 2001/10
ウシ心筋チトクロム酸化酵素のZn2+,Cd2+金属イオンの結合サイト, 平田邦生,山下栄樹,月原冨武,村本和優,青波里実,青山浩,伊藤(新沢)恭子,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 39th, 2001/10
還元型ウシ心筋チトクロム酸化酵素のX線結晶構造解析によるヘムa側鎖の構造変化, 村本和優,青波里実,青山浩,伊藤(新沢,恭子,小倉尚志,平田邦生,山下栄樹,月原冨武,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 39th, 2001/10
High resolution strucure analysis of bovine heart cytochrome c oxidase, Aoyama H.,Hirata K.,Yamashita E.,Tsukihara T.,Okada E.,Muramoto K.,Itoh-Shinzawa K.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 41, 2001
Structural change of heme a side chain revealed by x-ray crystallography of bovine heart cytochrome c oxidase in the reduced state., Muramoto K.,Aonami S.,Aoyama H.,Shinzawa-Itoh K.,Ogura T.,Hirata K.,Yamashita E.,Akitsu T.,Tsukihara T.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 41, 2001
The binding sites of Zn^<2+> and Cd^<2+> in bovine heart cytochrome c oxidase., Hirata K.,Yamashita E.,Tsukihara T.,Muramoto K.,Aonami S.,Aoyama H.,Shinzawa-Itoh K,Yoshikawa S, Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 41, 2001
Stractural Biology Topics タバコの自家不和合性に関与するS糖蛋白(S‐RNase)のMAD法を用いたX線結晶構造解析, 井田孝,佐藤衛,乗岡茂巳,崎山文夫,山下栄樹,山本雅貴,熊坂崇, 構造生物学, p. 15-16, 2001
生体超分子複合体構造解析ビームライン(BL44XU)の現状 (高輝度光科学研究センターS), 中川敦史,山下栄樹,月原冨武, SPring-8利用者情報, Vol. 5, No. 5, p. 340-343, 2000/09/18
生体超分子複合体構造解析ビームライン(SPring‐8)におけるX線結晶構造解析, 山下栄樹,中川敦史,山本雅貴,CHONG K T,松垣直宏,平田邦生,大床真美子,吉川信也,月原冨武, 生化学, Vol. 72, No. 8, 2000/08/25
Proton and water transfer pathways of bovine heart cytochrome C oxidase., S Yoshikawa,K Shinzawa-Itoh,K Muramoto,E Yamashita,H Aoyama,T Tsukihara, ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, AMER CHEMICAL SOC, Vol. 220, p. U168-U168, 2000/08
X-ray Crystal Structure of Bovine Heart Cytochrome c Oxidase., 山下栄樹,月原冨武, 生物物理, The Biophysical Society of Japan General Incorporated Association, Vol. 40, No. 1, p. 5-12, 2000/02
Crystallization of 70 S ribosome from the hyperthermophilic bacterium, Pyrococcus furiosus, Tanaka H.,Yamashita E.,Chong K.T.,Matsugaki N.,Nakaishi Y.,Michinomae M.,Uritani M.,Yamato M.,Ishino Y.,Nakagawa A.,Tsukihara T., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 40, 2000
X-ray structural refinement of cytochrome c oxidase at 2.0Å resolution by analysis of amino acid side-chain., Odoko M.,Nakashima R.,Mizushima T.,Yao M.,Yamashita E.,Shinzawa-Itoh K.,Yoshikawa S.,Tsukihara T., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 40, 2000
Functions of the big water cluster in bovine heart cytochrome c oxidase., Odoko M.,Yamashita E.,Tsukihara T.,Muramoto K.,Itoh-Shinzawa K.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 40, 2000
Pathway for protonn translocation in cytochrome c oxidase : Comparison of bovine and P. denitrificans enzymes., Aonami s.,Muramoto K.,Liveu Clare Peters,Yamashita E.,Yao M.,Mizushima T.,Tsukihara T.,Itoh-Shinzawa K.,Nakashima R.,Odoko M.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 40, 2000
チトクロム酸化酵素の結晶構造解析, 山下栄樹, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 42, p. 32-32, 2000
Data collection of bovine heart cytochrome c oxidase at 1.8Å resolution, Aoyama H.,Hirata K.,Yamashita E.,Tsukihara T.,Kato H.,Odoko M.,Muramoto K.,Itoh-Shinzawa K.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 40, 2000
The crystals of bovine heart cytochrome c oxidase in catalytic cycle., Muramoto K.,Ogura T.,Aoyama H.,Yamashita E.,Tsukihara T.,Itoh-Shinzawa K.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 40, 2000
The crystal structural analysis of bovine heart cytochrome c oxidase in catalytic cycle, Yamashita E,Hirata K.,Tsukihara T.,Aoyama H.,Muamoto K.,Itoh-Sinzawa K.,Yoshikawa S., Seibutsu Butsuri, The Biophysical Society of Japan General Incorporated Association, Vol. 40, 2000
チトクロム酸化酵素中の水の構造と機能, 大床真美子,中島良介,村本和優,伊藤,新沢恭子,吉川信也,YAO M,水島恒裕,山下栄樹,月原冨武, 日本生物物理学会年会講演予稿集, The Biophysical Society of Japan General Incorporated Association, Vol. 37th, 1999/09/02
チトクロム酸化酵素の水分子を捉える, 月原冨武,中島良介,大床真美子,ちょうびん,水島恒裕,山下栄樹,伊藤,新沢恭子,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 37th, 1999/09/02
チトクロム酸化酵素のプロトン輸送経路サブユニットI内のHチャネルの解析, 村本和優,LIBEU C P,山下栄樹,YAO M,水島恒裕,月原冨武,伊藤,新沢恭子,中島良介,吉川信也, 日本生物物理学会年会講演予稿集, The Biophysical Society of Japan General Incorporated Association, Vol. 37th, 1999/09/02
Construction of Macromolecular Assemblies (BL44XU)., 山下栄樹,月原冨武, SPring-8利用者情報, Vol. 4, No. 4, p. 28-30, 1999/07/15
チトクロムc酸化酵素における酸素還元・プロトン輸送機構析, 月原冨武,中島良介,大床真美子,ようびん,水島恒裕,山下栄樹,伊藤,新沢恭子,八百野リエ子,吉川信也, 生体分子科学討論会講演要旨集, Vol. 26th, p. 22-23, 1999/07
SPring‐8における蛋白質結晶構造解析多波長異常分散法に最適化したBL45XU(理研ビームラインI), 熊坂崇,山本雅貴,山下栄樹,森山英明,植木龍夫, スーパーコンピュータと専用計算機における計算科学講演要旨集, Vol. 1999, p. 45-46, 1999/03/16
ウシ心筋のチトクロム酸化酵素の高分解能回折強度測定, 平田邦生,中島良介,水島恒裕,山下栄樹,YAO M,月原冨武,村本和優,新沢‐伊藤恭子,吉川信也, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 12th, 1999/01/07
SPring‐8理研ビームラインに於ける4×4配列型CCD素子X線検出器の評価実験, 鈴木昌世,山本雅貴,熊坂崇,佐藤一道,豊川秀訓,山下栄樹,森山英明,植木龍夫, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 12th, 1999/01/07
低温酸化型チトクロム酸化酵素の2.0Å分解能での構造精密化, 大床真美子,中島良介,伊藤,新沢恭子,八百野リエ子,吉川信也,ようびん,水島恒裕,山下栄樹,月原冨武, 日本結晶学会年会講演要旨集, Vol. 1998, p. 35-35, 1998/11
ウシ心筋チトクロムc酸化酵素のアジド結合型の2.9Å結晶構造解析, 費明潔,山下栄樹,井上典子,ようびん,青山浩,富崎孝司,月原冨武,中島良介,吉川信也, 日本結晶学会年会講演要旨集, Vol. 1998, p. 34-34, 1998/11
理研ビームラインIでのMAD法, 熊坂崇,山本雅貴,山下栄樹,森山英明,植木龍夫, 日本結晶学会年会講演要旨集, Vol. 1998, p. 119-119, 1998/11
Conservation of the Proton Pump in Eukaryotic Cytochrome c oxidases, Yamashita Eiki,Clare Peters Libeu,Itoh-Shinzawa Kyoko,Nakashima Ryousuke,Yaono Rieko,Yoshikawa Shinya,Min Yao,Inoue Noriko,Aoyama Hiroshi,Yamaguchi Hiroshi,Tomizaki Takashi,Tsukihara Tomitake, Biophysics, The Biophysical Society of Japan General Incorporated Association, Vol. 38, No. 2, 1998/09/07
Structural organization of bovine heart cytochrome c oxidase., 山下栄樹,海野昌喜,水島恒裕,井上典子,青山浩,富崎孝司,山口宏,八百野リエ子,吉川信也, タンパク質構造討論会講演要旨集, Vol. 49th, 1998/09
膜蛋白質複合体チトクロム酸化酵素結晶の急速凍結法, 中島良介,伊藤(新沢)恭子,八百野リエ子,吉川信也,山下栄樹,水島恒裕,月原富武, 日本生物物理学会年会講演予稿集, Vol. 36th, 1998/09
真核生物におけるチトクロム酸化酵素のプロトン輸送機構の普遍性, 山下栄樹,LIBEU C P,伊藤(新沢)恭子,中島良介,八百野リエ子,吉川信也,MIN Y,井上典子,月原冨武, 日本生物物理学会年会講演予稿集, Vol. 36th, 1998/09
膜蛋白質複合体中に含まれるリン脂質の立体構造, 水島恒裕,MIN Y,井上典子,青山浩,山下栄樹,山口宏,月原冨武,中島良介,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 36th, 1998/09
膜蛋白質複合体,チトクロム酸化酵素の構造形成機構, 山下栄樹,水島恒裕,YAO M,LEE S J,青山浩,月原冨武,中島良介,新沢(伊藤)恭子,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 36th, 1998/09
水素イオン輸送におけるメチオニンの役割, YAO M,山下栄樹,月原冨武,伊藤(新沢)恭子,LIBEU C P,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 36th, 1998/09
シアン結合型ウシ心筋チトクロム酸化酵素の結晶構造, 村本和優,山下栄樹,YAO M,青山浩,富崎孝司,月原冨武,中島良介,伊藤(新沢)恭子,吉川信也, 日本生物物理学会年会講演予稿集, The Biophysical Society of Japan General Incorporated Association, Vol. 36th, No. 2, 1998/09
理研ビームラインI・蛋白質結晶構造解析ステーション, 山本雅貴,熊坂崇,山下栄樹,森山英明,植木龍夫, 日本放射光学会年会・放射光科学合同シンポジウム予稿集, Vol. 11th, 1998/01/09
Organism micro structure analysis ( Osaka Univ. ) beam line (BL44IN)., 山下栄樹, 構造生物学平成10年, 1998
The crystal structure of oxidized from Cytochrome c Oxidase at 2.3 A resolution, INOUE N.,MIZUSHIMA T.,YAO Min,MING JIE Fei,YAMASHITA E.,YAMAGUCHI H.,TOMIZAKI T.,TSUKIHARA T.,NAKASHIMA R.,ITOH-SHINZAWA K.,YAONO R.,YOSHIKAWA S., Biophysics, The Biophysical Society of Japan General Incorporated Association, Vol. 37, 1997/10
Crystalstructures of reduced, CO and cryo Cytochrome c Oxidase, MIZUSHIMA T.,INOUE N.,YAO Min,FEI Ming Jie,YAMASHITA E.,TOMIZAKI T.,SAKAI H.,YAMAGUCHI H.,TSUKIHARA T.,NAKASHIMA R.,SHINZAWA-ITOH K.,YAONO R.,YOSHIKAWA S., Biophysics, The Biophysical Society of Japan General Incorporated Association, Vol. 37, 1997/10
六方晶及び正方晶のウシ心筋チトクロム酸化酵素の結晶構造解析, LEE S J,福本義久,阿部敏雄,山下栄樹,月原冨武,伊藤,新沢恭子,山下博久,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 35th, 1997/09
ウシ心筋チトクロム酸化酵素の低温結晶のX線回折実験, 中島良介,伊藤,新沢恭子,八百野リエ子,吉川信也,山下栄樹,水島恒裕,井上典子,酒井宏明,月原冨武, 日本生物物理学会年会講演予稿集, Vol. 35th, 1997/09
Exclusive beam line. Outline of the biological supramolecular structure analysis ( Osaka Univ. ) beam line (BL44XU). ( High Intensity Light Science Research Center S )., 月原冨武,山下栄樹, SPring-8利用者情報, Vol. 2, No. 5, p. 28-31, 1997/09
酸化型チトクロムc酸化酵素2.3Å分解能結晶構造解析, 井上典子,Min Yao,山下栄樹,山口宏,富崎孝司,月原冨武,中島良介,伊藤-新沢恭子,八百野リエ子,吉川信也, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 39, p. 167-167, 1997
A mechanism of Cytochrome c Oxidase Proposed by the Crystal Structures at Different Oxidation and Ligand Binding States, TSUKIHARA Tomitake,AOYAMA Hiroshi,YAMASHITA Eiki,TOMIZAKI Takashi,YAMAGUCHI Hiroshi,SHINZAWA ITOH Kyoko,NAKASHIMA Ryosuke,YAONO Rieko,YOSHIKAWA Shinya, Vol. 45, 1996/12/01
還元型ウシ心筋チトクロムc酸化酵素のX線結晶構造解析, 山下栄樹,井上典子,山口宏,富崎孝司,青山宏,月原冨武,中島良介,伊藤(新沢)恭子,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 34th, 1996/10
チトクロム酸化酵素の還元型及び各種リガンド結合型の結晶の調製, 中島良介,伊藤(新沢)恭子,八百野リエ子,吉川信也,青山浩,山下栄樹,富崎孝司,山口宏,月原富武, 日本生物物理学会年会講演予稿集, Vol. 34th, 1996/10
The 7th Workshop on Neutron Crystallography in Biology., 中迫雅由,中川敦史,唐沢裕子,岩田豊,野田幸男,山口泰男,小泉智,山田和芳,山下栄樹, 日本原子力研究所JAERI-Conf, 1996/02
還元型チトクロム酸化酵素の構造精密化, 山下栄樹,井上典子,山口宏,富崎孝司,青山浩,月原冨武,中島良介,八百野リエ子,新沢恭子,吉川信也, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 38, p. 130-130, 1996
チトクロムc酸化酵素中のリン脂質の構造と機能, 月原冨武,山下栄樹,井上典子,山口宏,富崎孝司,青山浩,中島良介,伊藤―新沢恭子,八百野リエ子,吉川信也, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 38, p. 132-132, 1996
CO型チトクロムc酸化酵素のX線結晶構造解析, 井上典子,山下栄樹,山口宏,富崎孝司,青山浩,月原冨武,中島良介,伊藤―新沢恭子,八百野リエ子,吉川信也, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 38, p. 131-131, 1996
酸化型チトクロム酸化酵素の構造精密化, 山口宏,山下栄樹,井上典子,富崎孝司,青山浩,月原冨武,中島良介,伊藤一新,沢恭子,八百野リエ子,吉川信也, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 38, p. 129-129, 1996
チトクロム酸化酵素の膜貫通へリックスの傾きを決定する因子, 海野昌喜,山下栄樹,富崎孝司,山口宏,月原冨武,中島良介,伊藤-新沢恭子,八百野リエ子,吉川信也, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 38, p. 133-133, 1996
Crystal structure of the 13 subunit heart cytochrome C oxidase., H ShinzawaItoh,T Tsukihara,H Aoyama,E Yamashita,T Tomizaki,H Yamaguchi,R Nakashima,R Yaono,S Yoshikawa, PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, PERGAMON-ELSEVIER SCIENCE LTD, Vol. 65, p. PA111-PA111, 1996
ウシ心筋のチトクロム酸化酵素のX線結晶構造解析, 富崎孝司,青山浩,山下栄樹,山口宏,月原冨武,新沢恭子,中島良介,吉川信也, 日本結晶学会年会講演要旨集, Vol. 1995, p. 84-84, 1995/10
ウシ心筋のチトクロム酸化酵素のX線結晶解析活性中心及び26サブユニットの構造, 山下栄樹,富崎孝司,青山浩,山口宏,月原冨武,中島良介,八百野リエ子,新沢恭子,吉川信也, 日本結晶学会年会講演要旨集, Vol. 1995, p. 135-135, 1995/10
ウシ心筋のチトクロム酸化酵素のX線結晶構造解析回折強度データ収集, 青山浩,山下栄樹,富崎孝司,山口宏,月原冨武,新沢恭子,中島良介,吉川信也, 日本結晶学会年会講演要旨集, Vol. 1995, p. 83-83, 1995/10
Tertialy and quartanary structure of bovine heart cytochrome c oxidase., 青山浩,山下栄樹,富崎孝司,山口宏,月原富武,新沢恭子,中島良介,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 33rd, 1995/08
Structure of activity center of cattle heart muscle cytochrome oxydase., 中島良介,伊藤恭,八百野リエ子,吉川信也,青山浩,山下栄樹,富崎孝司,山口寛,月原富武, 日本生物物理学会年会講演予稿集, Vol. 33rd, 1995/08
The data processing of supramacromoleclar., 富崎孝司,青山浩,山下栄樹,月原冨武,新沢恭子,中島良介,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 33rd, 1995/08
Phase deteremination of bovine heart cytochrome c oxidase at high resolution., 山下栄樹,青山浩,富崎孝司,月原富武,新沢恭子,中島良介,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 33rd, 1995/08
Crystallization of film protein complex., 新沢恭子,中島良介,八百野リエ子,吉川信也,青山浩,山下栄樹,富崎孝史,月原富武, 日本生物物理学会年会講演予稿集, Vol. 33rd, 1995/08
On X-ray diffraction deta processing method of supramolecular complex crystal. DENZO and WEIS., 富崎孝司,山下栄樹,青山浩,内藤久志,森本幸生,月原冨武, 日本結晶学会年会講演要旨集, Vol. 1994, p. 112-112, 1994/11
Crystallization of Cytochrome Oxidase., 伊藤(新沢)恭子,八百野リエ子,中島良介,吉川信也,青山浩,山下栄樹,月原冨武, 日本生物物理学会年会講演予稿集, Vol. 32nd, 1994/09
Biological Supramolecular Crystallography., 山下栄樹,月原冨武, 日本結晶学会誌, The Crystallographic Society of Japan, Vol. 36, No. 4, p. 294-296, 1994/08
Development of Molecular Replacement Method for Strructure Analysis of Biological Macromolecular Assemblies., 山下栄樹,青山浩,森本幸生,月原冨武,新沢恭子,吉川信也, 日本化学会講演予稿集, Vol. 67th, No. 1, 1994/03
Crystal Structure Analysis of Bovine Heart Cytochrome c Oxidase at Low Resolution., 青山浩,山下栄樹,富崎孝司,森本幸生,月原冨武,伊藤(新沢)恭子,八百野リエ子,吉川信也, 生体エネルギー研究会討論会講演要旨集, Vol. 20th, p. 104-105, 1994
Crystal structure of bovine heart cytochrome c oxidase., 山下栄樹,青山浩,森本幸生,月原冨武,伊藤恭子,吉川信也, 日本生物物理学会年会講演予稿集, Vol. 31st, 1993/09
X-ray Crystal Structural Analysis of Biological Assembly., 月原富武,森本幸生,山下栄樹, 蛋白質核酸酵素, Vol. 38, No. 7, p. 1247-1253, 1993/05
Crystallization and crystallographic structure of bovine heart cytochrome c oxidase., 吉川信也,新沢恭子,青山浩,山下栄樹,月原富武,佐藤文乃,豊島近, 生体エネルギー研究会討論会講演要旨集, Vol. 19th, p. 32-33, 1993
ミトコンドリア呼吸鎖電子伝達複合体の結晶化, 新沢恭子,吉川信也,青山浩,山下栄樹,森本幸夫,月原富武,久保田智巳,河本正秀,松原央, 日本生物物理学会年会講演予稿集, Vol. 30th, 1992/10
チトクローム酸化酵素の低分解能結晶構造解析, 山下栄樹,福本義久,森本幸生,月原冨武,新沢恭子,吉川信也, 日本化学会講演予稿集, Vol. 63rd, No. 1, 1992/03

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球状粒子を形成する新規タンパク質、及びそのタンパク質をコードする新規遺伝子, 中川敦史,山下栄樹,田中秀明,月原冨武,石野良純, 特願2003-025057, 出願日:2003/01/31

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